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  5. Pir_g05874

Pir_g05874


Description : substrate adaptor of SCF E3 ubiquitin ligase complex & original description: none


Gene families : OG0004226 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004226_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g05874
Cluster HCCA: Cluster_238

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00065p00071220 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
AT1G23780 No alias F-box family protein 0.02 OrthoFinder output from all 47 species
MA_200955g0010 No alias component FBX of SCF E3 ubiquitin ligase complex 0.03 OrthoFinder output from all 47 species
Ore_g16300 No alias substrate adaptor of SCF E3 ubiquitin ligase complex &... 0.02 OrthoFinder output from all 47 species
Ppi_g14527 No alias substrate adaptor of SCF E3 ubiquitin ligase complex &... 0.02 OrthoFinder output from all 47 species
Tin_g01964 No alias substrate adaptor of SCF E3 ubiquiTin ligase complex &... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004486 methylenetetrahydrofolate dehydrogenase [NAD(P)+] activity IEP HCCA
MF GO:0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP HCCA
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0051087 chaperone binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
InterPro domains Description Start Stop
IPR001810 F-box_dom 344 386
No external refs found!