Smo270566 (PACid_15421045)


Aliases : PACid_15421045

Description : 25.1 C1-metabolism.glycine hydroxymethyltransferase Encodes a protein with mitochondrial serine hydroxymethyltransferase activity, which functions in the photorespiratory pathway, catalyzes the conversion of serine and tetrahydrofolate to glycine and 5,10-methylene tetrahydrofolate. Involved in controlling cell damage caused by abiotic stress, such as high light and salt and the hypersensitive defense response of plants. serine transhydroxymethyltransferase 1 (SHM1) FUNCTIONS IN: poly(U


Gene families : OG_01_0000425 (Gene family) Phylogenetic Tree(s): OG0000425_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Smo270566
Cluster HCCA cluster: Cluster_106

Target Alias Description ECC score Gene Family Method Actions
AT4G37930 STM, SHM1, SHMT1 serine transhydroxymethyltransferase 1 0.09 Gene family
Cpa|evm.model.tig00001130.31 No alias 25.1 C1-metabolism.glycine hydroxymethyltransferase... 0.05 Gene family
Cre16.g664550 No alias 25.1 C1-metabolism.glycine hydroxymethyltransferase... 0.01 Gene family
GSVIVT01003859001 No alias 25.1 C1-metabolism.glycine hydroxymethyltransferase... 0.08 Gene family
GSVIVT01009226001 No alias 25.1 C1-metabolism.glycine hydroxymethyltransferase... 0.02 Gene family
LOC_Os03g52840 Os03g0738400 25.1 C1-metabolism.glycine hydroxymethyltransferase... 0.06 Gene family
MA_99276g0010 No alias 25.1 C1-metabolism.glycine hydroxymethyltransferase... 0.03 Gene family
Solyc02g091560.3.1 Solyc02g091560.3 25.1 C1-metabolism.glycine hydroxymethyltransferase... 0.06 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR039429 SHMT-like_dom 74 469
No external refs found!