1. Home
  2. Species
  3. Pleocnemia irregularis
  4. Sequence
  5. Pir_g05596

Pir_g05596


Description : not classified & original description: none


Gene families : OG0000563 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000563_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g05596

Target Alias Description ECC score Gene Family Method Actions
Adi_g014575 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g014576 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g13060 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0004.g008886 No alias not classified & original description: CDS=46-1419 0.03 OrthoFinder output from all 47 species
Ceric.02G052200.1 Ceric.02G052200 A1-class (Pepsin) protease & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.19G006800.1 Ceric.19G006800 not classified & original description: pacid=50575954... 0.04 OrthoFinder output from all 47 species
Cre04.g219950 No alias No description available 0.01 OrthoFinder output from all 47 species
Cre17.g741850 No alias No description available 0.02 OrthoFinder output from all 47 species
Dac_g05608 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g06813 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g01493 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g06242 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g03990 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp3g08570.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Pnu_g25967 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g37444 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g38344 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g05527 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g07553 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g18433 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g10491 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0030151 molybdenum ion binding IEP HCCA
CC GO:0030684 preribosome IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
MF GO:0031625 ubiquitin protein ligase binding IEP HCCA
CC GO:0032040 small-subunit processome IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
MF GO:0044389 ubiquitin-like protein ligase binding IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 142 208
IPR000504 RRM_dom 24 91
IPR000504 RRM_dom 290 356
No external refs found!