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  5. Pir_g05173

Pir_g05173


Description : regulatory factor *(TZF) of mRNA stress granule formation & original description: none


Gene families : OG0000156 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000156_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g05173
Cluster HCCA: Cluster_270

Target Alias Description ECC score Gene Family Method Actions
Ala_g05322 No alias regulatory factor *(TZF) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Als_g20738 No alias regulatory factor *(TZF) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Aob_g20797 No alias regulatory factor *(TZF) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Cre03.g146267 ATTZF1, ATCTH RNA biosynthesis.transcriptional activation.C3H zinc... 0.02 OrthoFinder output from all 47 species
Dcu_g14003 No alias regulatory factor *(TZF) of mRNA stress granule... 0.02 OrthoFinder output from all 47 species
Ehy_g04434 No alias regulatory factor *(TZF) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
LOC_Os12g33090.1 LOC_Os12g33090 mRNA-binding regulatory factor (TZF) 0.02 OrthoFinder output from all 47 species
Lfl_g06722 No alias regulatory factor *(TZF) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
MA_11306g0010 No alias mRNA-binding regulatory factor (TZF) 0.02 OrthoFinder output from all 47 species
Mp6g00540.1 No alias mRNA-binding regulatory factor (TZF) 0.02 OrthoFinder output from all 47 species
Msp_g15903 No alias regulatory factor *(TZF) of mRNA stress granule... 0.04 OrthoFinder output from all 47 species
Nbi_g10809 No alias regulatory factor *(TZF) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Nbi_g22895 ATTZF1, ATCTH regulatory factor *(TZF) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Pnu_g15715 No alias regulatory factor *(TZF) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Ppi_g04592 ATTZF1, ATCTH regulatory factor *(TZF) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Ppi_g43622 No alias regulatory factor *(TZF) of mRNA stress granule... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0011.g005148 No alias regulatory factor *(TZF) of mRNA stress granule... 0.02 OrthoFinder output from all 47 species
Sam_g04991 No alias regulatory factor *(TZF) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Solyc12g008660.1.1 Solyc12g008660 mRNA-binding regulatory factor (TZF) 0.02 OrthoFinder output from all 47 species
Spa_g30406 No alias regulatory factor *(TZF) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Spa_g43052 No alias regulatory factor *(TZF) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Tin_g34269 ATTZF1, ATCTH regulatory factor *(TZF) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Zm00001e032199_P001 ATTZF1, ATCTH,... mRNA-binding regulatory factor (TZF) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
InterPro domains Description Start Stop
IPR041367 Znf-CCCH_4 343 363
IPR002110 Ankyrin_rpt 64 162
No external refs found!