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  5. Pir_g05106

Pir_g05106 (SEC5A)


Aliases : SEC5A

Description : component *(SEC5) of Exocyst complex & original description: none


Gene families : OG0003582 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003582_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g05106

Target Alias Description ECC score Gene Family Method Actions
Adi_g054733 SEC5A component *(SEC5) of Exocyst complex & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.19G007800.1 SEC5A, Ceric.19G007800 component *(SEC5) of Exocyst complex & original... 0.03 OrthoFinder output from all 47 species
Ceric.1Z270400.1 SEC5A, Ceric.1Z270400 component *(SEC5) of Exocyst complex & original... 0.01 OrthoFinder output from all 47 species
Dcu_g01984 SEC5A component *(SEC5) of Exocyst complex & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g04241 SEC5A component *(SEC5) of Exocyst complex & original description: none 0.03 OrthoFinder output from all 47 species
Mp4g01630.1 SEC5B component SEC5 of Exocyst complex 0.04 OrthoFinder output from all 47 species
Msp_g13153 SEC5A component *(SEC5) of Exocyst complex & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g42488 SEC5A component *(SEC5) of Exocyst complex & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g37593 SEC5B component *(SEC5) of Exocyst complex & original description: none 0.03 OrthoFinder output from all 47 species
Smo267231 SEC5B Vesicle trafficking.target membrane tethering.Exocyst... 0.03 OrthoFinder output from all 47 species
Spa_g21204 SEC5A component *(SEC5) of Exocyst complex & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e040866_P001 SEC5A, Zm00001e040866 component SEC5 of Exocyst complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0005546 phosphatidylinositol-4,5-bisphosphate binding IEP HCCA
CC GO:0005681 spliceosomal complex IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
BP GO:0046903 secretion IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
BP GO:0140352 export from cell IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901981 phosphatidylinositol phosphate binding IEP HCCA
MF GO:1902936 phosphatidylinositol bisphosphate binding IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR039481 EXOC2/Sec5_N_dom 169 1047
No external refs found!