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  5. Smo270225

Smo270225 (PACid_15418749)


Aliases : PACid_15418749

Description : 27.3.22 RNA.regulation of transcription.HB,Homeobox transcription factor family Member of the class III HD-ZIP protein family. Contains homeodomain and leucine zipper domain. Critical for vascular development and negatively regulates vascular cell differentiation. ATHB-15 CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Lipid-binding START (InterPro:IPR002913), MEKHLA (InterPro:IPR013978), Homeodomain-related (InterPro:IPR012287) BEST Arabidopsis thaliana protein match is: homeobox gene 8 (TAIR:AT4G32880.1) Has 3126 Blast hits to 3055 proteins in 249 species: Archae - 0 Bacteria - 0 Metazoa - 767 Fungi - 91 Plants - 2233 Viruses - 0 Other Eukaryotes - 35 (source: NCBI BLink). (original description: no original description)'


Gene families : OG_01_0000594 (Gene family) Phylogenetic Tree(s): OG0000594_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Smo270225
Cluster HCCA cluster: Cluster_125

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01021625001 No alias 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.02 Gene family
GSVIVT01025193001 No alias 33.99 development.unspecified REVOLUTA regulates... 0.02 Gene family
LOC_Os12g41860 Os12g0612700 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.02 Gene family
MA_10427484g0010 No alias 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.02 Gene family
Solyc03g120910.3.1 Solyc03g120910.3 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.04 Gene family

Type GO Term Name Evidence Source
MF GO:0008289 lipid binding IEA InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002913 START_lipid-bd_dom 190 393
No external refs found!