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  5. Pir_g04477

Pir_g04477


Description : component *(TWD40) of TPLATE AP-2 co-adaptor complex & original description: none


Gene families : OG0005180 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005180_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g04477

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00027p00213280 evm_27.TU.AmTr_v1... Vesicle trafficking.clathrin coated vesicle (CCV)... 0.02 OrthoFinder output from all 47 species
AT5G24710 No alias Transducin/WD40 repeat-like superfamily protein 0.04 OrthoFinder output from all 47 species
Adi_g055941 No alias component *(TWD40) of TPLATE AP-2 co-adaptor complex &... 0.03 OrthoFinder output from all 47 species
Adi_g102290 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g02602 No alias component *(TWD40) of TPLATE AP-2 co-adaptor complex &... 0.02 OrthoFinder output from all 47 species
Ala_g04924 No alias component *(TWD40) of TPLATE AP-2 co-adaptor complex &... 0.02 OrthoFinder output from all 47 species
Als_g28919 No alias component *(TWD40) of TPLATE AP-2 co-adaptor complex &... 0.05 OrthoFinder output from all 47 species
Aop_g31280 No alias component *(TWD40) of TPLATE AP-2 co-adaptor complex &... 0.03 OrthoFinder output from all 47 species
Cre12.g535350 No alias No description available 0.02 OrthoFinder output from all 47 species
Dcu_g06508 No alias component *(TWD40) of TPLATE AP-2 co-adaptor complex &... 0.03 OrthoFinder output from all 47 species
Dde_g02995 No alias component *(TWD40) of TPLATE AP-2 co-adaptor complex &... 0.03 OrthoFinder output from all 47 species
GSVIVT01029823001 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.03 OrthoFinder output from all 47 species
Gb_38178 No alias component TWD40 of TPLATE AP-2 co-adaptor complex 0.03 OrthoFinder output from all 47 species
LOC_Os01g46510.1 LOC_Os01g46510 component TWD40 of TPLATE AP-2 co-adaptor complex 0.04 OrthoFinder output from all 47 species
Lfl_g07125 No alias component *(TWD40) of TPLATE AP-2 co-adaptor complex &... 0.02 OrthoFinder output from all 47 species
Mp2g04690.1 No alias component TWD40 of TPLATE AP-2 co-adaptor complex 0.02 OrthoFinder output from all 47 species
Msp_g15509 No alias component *(TWD40) of TPLATE AP-2 co-adaptor complex &... 0.03 OrthoFinder output from all 47 species
Sam_g16152 No alias component *(TWD40) of TPLATE AP-2 co-adaptor complex &... 0.02 OrthoFinder output from all 47 species
Solyc01g102510.4.1 Solyc01g102510 component TWD40 of TPLATE AP-2 co-adaptor complex 0.02 OrthoFinder output from all 47 species
Tin_g08751 No alias component *(TWD40) of TPLATE AP-2 co-adaptor complex &... 0.03 OrthoFinder output from all 47 species
Zm00001e020289_P001 Zm00001e020289 component TWD40 of TPLATE AP-2 co-adaptor complex 0.05 OrthoFinder output from all 47 species
Zm00001e027982_P002 Zm00001e027982 component TWD40 of TPLATE AP-2 co-adaptor complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0000226 microtubule cytoskeleton organization IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0004576 oligosaccharyl transferase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005856 cytoskeleton IEP HCCA
CC GO:0005875 microtubule associated complex IEP HCCA
CC GO:0005885 Arp2/3 protein complex IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0007015 actin filament organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007051 spindle organization IEP HCCA
BP GO:0009987 cellular process IEP HCCA
CC GO:0015629 actin cytoskeleton IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034314 Arp2/3 complex-mediated actin nucleation IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0045010 actin nucleation IEP HCCA
BP GO:0051225 spindle assembly IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
CC GO:0070652 HAUS complex IEP HCCA
BP GO:0070925 organelle assembly IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
BP GO:0097435 supramolecular fiber organization IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:0140694 non-membrane-bounded organelle assembly IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!