AT5G03290 (IDH-V)

Aliases : IDH-V

Description : isocitrate dehydrogenase V

Gene families : OG_01_0005314 (Archaeplastida) Phylogenetic Tree(s): OG_01_0005314_tree ,
OG_02_0005019 (LandPlants) Phylogenetic Tree(s): OG_02_0005019_tree ,
OG_03_0005968 (SeedPlants) Phylogenetic Tree(s): OG_03_0005968_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G03290
Cluster	HCCA: Cluster_81

Target	Alias	Description	ECC score	Gene Family Method
Smo233612	No alias	Cellular respiration.tricarboxylic acid cycle.isocitrate...	0.04	Archaeplastida
Solyc08g077920.3.1	No alias	catalytic component of isocitrate dehydrogenase heterodimer	0.04	Archaeplastida
Solyc08g077930.3.1	No alias	catalytic component of isocitrate dehydrogenase heterodimer	0.03	Archaeplastida
Zm00001e025490_P003	No alias	catalytic component of isocitrate dehydrogenase heterodimer	0.04	Archaeplastida
Smo233612	No alias	Cellular respiration.tricarboxylic acid cycle.isocitrate...	0.04	LandPlants
Solyc08g077920.3.1	No alias	catalytic component of isocitrate dehydrogenase heterodimer	0.04	LandPlants
Solyc08g077930.3.1	No alias	catalytic component of isocitrate dehydrogenase heterodimer	0.03	LandPlants
Zm00001e025490_P003	No alias	catalytic component of isocitrate dehydrogenase heterodimer	0.04	LandPlants
GSVIVT01025704001	No alias	Cellular respiration.tricarboxylic acid cycle.isocitrate...	0.02	SeedPlants
LOC_Os01g16900.1	No alias	catalytic component of isocitrate dehydrogenase heterodimer	0.02	SeedPlants
Solyc08g077920.3.1	No alias	catalytic component of isocitrate dehydrogenase heterodimer	0.04	SeedPlants
Solyc08g077930.3.1	No alias	catalytic component of isocitrate dehydrogenase heterodimer	0.03	SeedPlants
Zm00001e025490_P003	No alias	catalytic component of isocitrate dehydrogenase heterodimer	0.04	SeedPlants

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004448	isocitrate dehydrogenase activity	None	Extended
MF	GO:0004449	isocitrate dehydrogenase (NAD+) activity	IMP	Interproscan
MF	GO:0004449	isocitrate dehydrogenase (NAD+) activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IDA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular anatomical structure	None	Extended
CC	GO:0005739	mitochondrion	IDA	Interproscan
CC	GO:0005739	mitochondrion	ISM	Interproscan
BP	GO:0006066	alcohol metabolic process	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006099	tricarboxylic acid cycle	TAS	Interproscan
BP	GO:0006102	isocitrate metabolic process	IMP	Interproscan
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006511	ubiquitin-dependent protein catabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	ISS	Interproscan
MF	GO:0008270	zinc ion binding	IDA	Interproscan
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
CC	GO:0009507	chloroplast	IDA	Interproscan
CC	GO:0009536	plastid	None	Extended
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009735	response to cytokinin	RCA	Interproscan
BP	GO:0009743	response to carbohydrate	None	Extended
BP	GO:0009744	response to sucrose	RCA	Interproscan
BP	GO:0009746	response to hexose	None	Extended
BP	GO:0009749	response to glucose	RCA	Interproscan
BP	GO:0009750	response to fructose	RCA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010498	proteasomal protein catabolic process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016049	cell growth	None	Extended
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	None	Extended
MF	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0019941	modification-dependent protein catabolic process	None	Extended
BP	GO:0022607	cellular component assembly	None	Extended
BP	GO:0030163	protein catabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
BP	GO:0032502	developmental process	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
BP	GO:0034284	response to monosaccharide	None	Extended
BP	GO:0034285	response to disaccharide	None	Extended
BP	GO:0034622	cellular protein-containing complex assembly	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
BP	GO:0035966	response to topologically incorrect protein	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0040007	growth	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process	RCA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043248	proteasome assembly	RCA	Interproscan
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0043632	modification-dependent macromolecule catabolic process	None	Extended
BP	GO:0043933	protein-containing complex subunit organization	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044265	cellular macromolecule catabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0048588	developmental cell growth	None	Extended
BP	GO:0048589	developmental growth	None	Extended
BP	GO:0048767	root hair elongation	RCA	Interproscan
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051603	proteolysis involved in cellular protein catabolic process	None	Extended
BP	GO:0051788	response to misfolded protein	RCA	Interproscan
BP	GO:0060560	developmental growth involved in morphogenesis	None	Extended
BP	GO:0065003	protein-containing complex assembly	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0072350	tricarboxylic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901565	organonitrogen compound catabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended
BP	GO:1901615	organic hydroxy compound metabolic process	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended
BP	GO:1902652	secondary alcohol metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR024084	IsoPropMal-DH-like_dom	47	370

External Links

No external refs found!

AT5G03290 (IDH-V)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation