AT5G03150 (JKD)


Aliases : JKD

Description : C2H2-like zinc finger protein


Gene families : OG_01_0000200 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000200_tree ,
OG_02_0000106 (LandPlants) Phylogenetic Tree(s): OG_02_0000106_tree ,
OG_03_0000058 (SeedPlants) Phylogenetic Tree(s): OG_03_0000058_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G03150
Cluster HCCA: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00204520 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 Archaeplastida
AT1G03840 MGP C2H2 and C2HC zinc fingers superfamily protein 0.03 Archaeplastida
AT1G55110 AtIDD7, IDD7 indeterminate(ID)-domain 7 0.04 Archaeplastida
Gb_24099 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
LOC_Os01g09850.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
LOC_Os01g14010.1 No alias C2H2 zinc finger transcription factor 0.05 Archaeplastida
Pp3c2_22070V3.1 No alias C2H2-like zinc finger protein 0.02 Archaeplastida
Pp3c5_20980V3.1 No alias C2H2-like zinc finger protein 0.02 Archaeplastida
Solyc01g005060.3.1 No alias C2H2 zinc finger transcription factor 0.05 Archaeplastida
Solyc03g098070.3.1 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Solyc06g072360.3.1 No alias C2H2 zinc finger transcription factor 0.05 Archaeplastida
Zm00001e000980_P002 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Zm00001e010628_P002 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Zm00001e026143_P001 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Zm00001e027791_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
AMTR_s00002p00270520 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 LandPlants
AMTR_s00057p00204520 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 LandPlants
AT1G03840 MGP C2H2 and C2HC zinc fingers superfamily protein 0.03 LandPlants
AT1G55110 AtIDD7, IDD7 indeterminate(ID)-domain 7 0.04 LandPlants
GSVIVT01010961001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 LandPlants
Gb_24099 No alias C2H2 zinc finger transcription factor 0.03 LandPlants
LOC_Os01g14010.1 No alias C2H2 zinc finger transcription factor 0.05 LandPlants
LOC_Os01g39110.1 No alias C2H2 zinc finger transcription factor 0.02 LandPlants
Solyc01g005060.3.1 No alias C2H2 zinc finger transcription factor 0.03 LandPlants
Solyc03g098070.3.1 No alias C2H2 zinc finger transcription factor 0.03 LandPlants
Solyc06g072360.3.1 No alias C2H2 zinc finger transcription factor 0.03 LandPlants
Solyc09g065670.3.1 No alias C2H2 zinc finger transcription factor 0.02 LandPlants
Zm00001e026143_P001 No alias C2H2 zinc finger transcription factor 0.04 LandPlants
Zm00001e027791_P001 No alias C2H2 zinc finger transcription factor 0.03 LandPlants
AMTR_s00036p00077430 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 SeedPlants
Gb_24099 No alias C2H2 zinc finger transcription factor 0.03 SeedPlants
LOC_Os01g14010.1 No alias C2H2 zinc finger transcription factor 0.03 SeedPlants
LOC_Os01g39110.1 No alias C2H2 zinc finger transcription factor 0.02 SeedPlants
Solyc01g005060.3.1 No alias C2H2 zinc finger transcription factor 0.03 SeedPlants
Solyc03g098070.3.1 No alias C2H2 zinc finger transcription factor 0.02 SeedPlants
Solyc06g072360.3.1 No alias C2H2 zinc finger transcription factor 0.03 SeedPlants
Zm00001e026143_P001 No alias C2H2 zinc finger transcription factor 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding ISS Interproscan
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
MF GO:0005515 protein binding IPI Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006355 regulation of transcription, DNA-templated TAS Interproscan
MF GO:0008270 zinc ion binding ISS Interproscan
BP GO:0010075 regulation of meristem growth IMP Interproscan
MF GO:0042803 protein homodimerization activity IPI Interproscan
BP GO:0045604 regulation of epidermal cell differentiation IMP Interproscan
BP GO:0048364 root development IMP Interproscan
BP GO:0048527 lateral root development RCA Interproscan
BP GO:0048589 developmental growth RCA Interproscan
BP GO:0048765 root hair cell differentiation RCA Interproscan
BP GO:0051302 regulation of cell division IMP Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR013087 Znf_C2H2_type 82 104
No external refs found!