AT5G02830


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_01_0006806 (Archaeplastida) Phylogenetic Tree(s): OG_01_0006806_tree ,
OG_02_0007343 (LandPlants) Phylogenetic Tree(s): OG_02_0007343_tree ,
OG_03_0007467 (SeedPlants) Phylogenetic Tree(s): OG_03_0007467_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G02830
Cluster HCCA: Cluster_175

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00023p00232870 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g02830,... 0.02 Archaeplastida
GSVIVT01025541001 No alias Pentatricopeptide repeat-containing protein At5g02830,... 0.08 Archaeplastida
LOC_Os03g17634.1 No alias Pentatricopeptide repeat-containing protein At5g02830,... 0.04 Archaeplastida
Pp3c22_3070V3.1 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Archaeplastida
Smo84012 No alias Pentatricopeptide repeat-containing protein At5g02830,... 0.02 Archaeplastida
Solyc09g007200.4.1 No alias Pentatricopeptide repeat-containing protein At5g02830,... 0.12 Archaeplastida
Zm00001e038437_P002 No alias Pentatricopeptide repeat-containing protein At5g02830,... 0.09 Archaeplastida
GSVIVT01025541001 No alias Pentatricopeptide repeat-containing protein At5g02830,... 0.08 LandPlants
LOC_Os03g17634.1 No alias Pentatricopeptide repeat-containing protein At5g02830,... 0.03 LandPlants
Pp3c22_3070V3.1 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 LandPlants
Solyc09g007200.4.1 No alias Pentatricopeptide repeat-containing protein At5g02830,... 0.11 LandPlants
Zm00001e038437_P002 No alias Pentatricopeptide repeat-containing protein At5g02830,... 0.07 LandPlants
GSVIVT01025541001 No alias Pentatricopeptide repeat-containing protein At5g02830,... 0.08 SeedPlants
LOC_Os03g17634.1 No alias Pentatricopeptide repeat-containing protein At5g02830,... 0.03 SeedPlants
Solyc09g007200.4.1 No alias Pentatricopeptide repeat-containing protein At5g02830,... 0.11 SeedPlants
Zm00001e038437_P002 No alias Pentatricopeptide repeat-containing protein At5g02830,... 0.07 SeedPlants

Type GO Term Name Evidence Source
CC GO:0005739 mitochondrion ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 375 405
IPR002885 Pentatricopeptide_repeat 337 364
IPR002885 Pentatricopeptide_repeat 580 638
IPR002885 Pentatricopeptide_repeat 407 454
No external refs found!