AT5G02530

Description : RNA-binding (RRM/RBD/RNP motifs) family protein

Gene families : OG_01_0001027 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001027_tree ,
OG_02_0000803 (LandPlants) Phylogenetic Tree(s): OG_02_0000803_tree ,
OG_03_0000994 (SeedPlants) Phylogenetic Tree(s): OG_03_0000994_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G02530
Cluster	HCCA: Cluster_36

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00000194.40	No alias	RNA processing.messenger ribonucleoprotein particle...	0.02	Archaeplastida
MA_102122g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_4147g0010	No alias	mRNA-binding adaptor component ALY/Tho4 of TREX/THO mRNP...	0.03	Archaeplastida
Solyc10g086400.2.1	No alias	mRNA-binding adaptor component ALY/Tho4 of TREX/THO mRNP...	0.03	Archaeplastida
Solyc10g086400.2.1	No alias	mRNA-binding adaptor component ALY/Tho4 of TREX/THO mRNP...	0.03	LandPlants
Zm00001e033165_P001	No alias	mRNA-binding adaptor component ALY/Tho4 of TREX/THO mRNP...	0.02	LandPlants

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000504	RRM_dom	110	178

External Links

No external refs found!