Pir_g03419 (MBD05, MBD5, ATMBD5)

Aliases : MBD05, MBD5, ATMBD5

Description : not classified & original description: none

Gene families : OG0000559 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000559_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pir_g03419

Target	Alias	Description	ECC score	Gene Family Method
Gb_12376	MBD05, MBD5, ATMBD5	methylation reader (MBD5-6)	0.03	OrthoFinder output from all 47 species
Msp_g15860	ATMBD6, MBD6	methylation reader *(MBD5-6) & original description: none	0.04	OrthoFinder output from all 47 species
Nbi_g05822	MBD05, MBD5, ATMBD5	methylation reader *(MBD5-6) & original description: none	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
CC	GO:0005634	nucleus	IEP	HCCA
MF	GO:0008289	lipid binding	IEP	HCCA
CC	GO:0043227	membrane-bounded organelle	IEP	HCCA
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001739	Methyl_CpG_DNA-bd	215	261

External Links

No external refs found!