Pir_g03334


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g03334

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00039p00210570 EMB2758 Pentatricopeptide repeat-containing protein At3g12770... 0.02 OrthoFinder output from all 47 species
AMTR_s00061p00158010 evm_27.TU.AmTr_v1... Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
AT4G20010 PTAC9, OSB2 plastid transcriptionally active 9 0.04 OrthoFinder output from all 47 species
Adi_g005549 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g023764 LPA66 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g033689 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g035455 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g036743 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g067176 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g067809 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g02126 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g44555 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g31194 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g36522 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g09923 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g29683 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g36666 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g69297 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g70449 DOT4 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene01199.t1 OTP86, Aspi01Gene01199 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0015.g013978 CRR22 not classified & original description: CDS=1-2136 0.03 OrthoFinder output from all 47 species
Cba_g03281 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g31685 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g38847 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g76162 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.04G040300.1 CRR22, Ceric.04G040300 not classified & original description: pacid=50630674... 0.03 OrthoFinder output from all 47 species
Ceric.11G093500.1 VAC1, ECB2,... not classified & original description: pacid=50595637... 0.03 OrthoFinder output from all 47 species
Ceric.14G004700.1 Ceric.14G004700 not classified & original description: pacid=50634585... 0.03 OrthoFinder output from all 47 species
Ceric.28G059600.1 OTP84, Ceric.28G059600 not classified & original description: pacid=50569965... 0.03 OrthoFinder output from all 47 species
Dac_g04194 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g09346 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g14062 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g18152 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g18423 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g29019 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g30287 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g33321 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g35240 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08816 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g21324 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g38628 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g46395 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g04417 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g18184 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22987 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g26325 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g46789 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g50253 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g26930 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01008965001 No alias Pentatricopeptide repeat-containing protein At4g18520,... 0.02 OrthoFinder output from all 47 species
LOC_Os02g44480.1 LOC_Os02g44480 Pentatricopeptide repeat-containing protein At5g39350... 0.02 OrthoFinder output from all 47 species
LOC_Os08g06490.2 SLO1, LOC_Os08g06490 Pentatricopeptide repeat-containing protein At4g22760... 0.02 OrthoFinder output from all 47 species
LOC_Os08g37520.1 LOC_Os08g37520 Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
LOC_Os10g34720.1 LOI1, MEF11,... Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
Len_g03808 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07433 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g40602 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_135075g0020 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.04 OrthoFinder output from all 47 species
MA_179801g0020 EMB2261 Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
MA_94165g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 47 species
Msp_g03763 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g06496 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g08590 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g09823 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g14968 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g16922 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g19273 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g19838 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g23144 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g28021 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g34024 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g41112 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g45039 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g46039 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g07086 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g17268 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g21363 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g27823 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g27949 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g42335 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g13334 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57161 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g04526 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g04536 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g04547 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g15168 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g15704 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g15725 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g16163 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g16169 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g29834 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g29837 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g30109 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g30286 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g30593 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g30641 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g03779 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06477 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g07557 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g22081 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g42008 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g43935 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g46631 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53202 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53699 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0018.g007447 No alias not classified & original description: CDS=108-3026 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0021.g008323 No alias not classified & original description: CDS=476-3628 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0029.g010017 No alias not classified & original description: CDS=111-3410 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0093.g019001 No alias not classified & original description: CDS=1-2865 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0108.g020410 No alias not classified & original description: CDS=1-2748 0.03 OrthoFinder output from all 47 species
Sam_g27788 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo75659 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
Solyc04g051480.1.1 OTP84, Solyc04g051480 Pentatricopeptide repeat-containing protein At4g13650... 0.02 OrthoFinder output from all 47 species
Spa_g14314 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g55587 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g06083 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g09161 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g17624 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 76 123
IPR002885 Pentatricopeptide_repeat 178 225
IPR002885 Pentatricopeptide_repeat 281 327
IPR002885 Pentatricopeptide_repeat 255 278
No external refs found!