Pir_g02826


Description : not classified & original description: none


Gene families : OG0013460 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): OG0013460_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g02826
Cluster HCCA: Cluster_58

Target Alias Description ECC score Gene Family Method Actions
Adi_g003221 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 39 species
Azfi_s0151.g053374 No alias ssDNA-binding protein *(OSB) & original description: CDS=217-2670 0.02 OrthoFinder output from all 39 species
Dac_g07312 No alias not classified & original description: none 0.01 OrthoFinder output from all 39 species
Dac_g36042 No alias not classified & original description: none 0.03 OrthoFinder output from all 39 species
Dde_g18670 EMB2758 not classified & original description: none 0.01 OrthoFinder output from all 39 species
Len_g44151 No alias not classified & original description: none 0.02 OrthoFinder output from all 39 species
Lfl_g22008 OTP84 not classified & original description: none 0.01 OrthoFinder output from all 39 species
Msp_g41395 No alias not classified & original description: none 0.01 OrthoFinder output from all 39 species
Tin_g26722 No alias not classified & original description: none 0.02 OrthoFinder output from all 39 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 200 223
IPR002885 Pentatricopeptide_repeat 98 118
IPR002885 Pentatricopeptide_repeat 304 327
IPR002885 Pentatricopeptide_repeat 405 427
IPR002885 Pentatricopeptide_repeat 328 376
IPR002885 Pentatricopeptide_repeat 123 170
IPR002885 Pentatricopeptide_repeat 226 273
IPR002885 Pentatricopeptide_repeat 22 68
No external refs found!