Pir_g02808 (EMB2758)


Aliases : EMB2758

Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g02808

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00235510 OTP84,... Pentatricopeptide repeat-containing protein DOT4,... 0.03 OrthoFinder output from all 47 species
AT2G33680 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G47840 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT4G18840 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.05 OrthoFinder output from all 47 species
AT4G33170 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G39680 EMB2744 Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g002881 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g003353 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g003742 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g004528 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g005586 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g011562 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g012320 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g036824 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g056363 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g058999 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g067856 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g069068 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g083433 EMB2261 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g104368 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07446 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g16270 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g09005 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27311 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27602 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27890 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g28645 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g41404 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g17445 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g68127 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0011.g012535 No alias not classified & original description: CDS=1-2328 0.04 OrthoFinder output from all 47 species
Azfi_s0229.g059121 CRR22 not classified & original description: CDS=1-2070 0.03 OrthoFinder output from all 47 species
Cba_g15277 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g20506 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.07G024400.1 Ceric.07G024400 not classified & original description: pacid=50626298... 0.03 OrthoFinder output from all 47 species
Ceric.25G042100.1 Ceric.25G042100 not classified & original description: pacid=50593153... 0.03 OrthoFinder output from all 47 species
Ceric.31G027200.1 OTP86, Ceric.31G027200 not classified & original description: pacid=50574199... 0.03 OrthoFinder output from all 47 species
Dac_g03344 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g03843 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g04194 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g04664 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g05692 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g09346 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g15087 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g18431 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g18775 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g19052 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g22073 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g24515 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g25031 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g25217 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g25258 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g27114 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g30464 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g31874 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g33204 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g33233 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g34941 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g35460 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g35674 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g36005 CRR2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g38568 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g39374 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g43253 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g44606 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g05681 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g05682 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g07752 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g08284 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g08934 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g13518 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g23686 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g38644 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g40960 CRR2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g41902 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g43746 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g44355 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g15862 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g44004 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g46766 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01000072001 No alias Pentatricopeptide repeat-containing protein At3g05340... 0.03 OrthoFinder output from all 47 species
GSVIVT01003453001 OTP80 RNA processing.organelle machineries.RNA... 0.04 OrthoFinder output from all 47 species
GSVIVT01003804001 CRR22 Pentatricopeptide repeat-containing protein At5g16860... 0.05 OrthoFinder output from all 47 species
GSVIVT01007811001 No alias Pentatricopeptide repeat-containing protein At3g22690... 0.03 OrthoFinder output from all 47 species
GSVIVT01010654001 No alias Pentatricopeptide repeat-containing protein At4g38010... 0.03 OrthoFinder output from all 47 species
GSVIVT01015521001 No alias Pentatricopeptide repeat-containing protein At4g32430,... 0.03 OrthoFinder output from all 47 species
GSVIVT01017075001 OTP82 Pentatricopeptide repeat-containing protein At3g12770... 0.03 OrthoFinder output from all 47 species
GSVIVT01024915001 No alias Pentatricopeptide repeat-containing protein At5g16860... 0.03 OrthoFinder output from all 47 species
GSVIVT01028697001 EMB2261 Pentatricopeptide repeat-containing protein At3g49170,... 0.04 OrthoFinder output from all 47 species
GSVIVT01033837001 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
GSVIVT01035837001 LPA66 Pentatricopeptide repeat-containing protein At4g21065... 0.03 OrthoFinder output from all 47 species
GSVIVT01038381001 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
Gb_19040 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
LOC_Os02g07050.1 LOC_Os02g07050 Pentatricopeptide repeat-containing protein At4g20770... 0.03 OrthoFinder output from all 47 species
LOC_Os04g35650.1 LOC_Os04g35650 Pentatricopeptide repeat-containing protein At3g26540... 0.03 OrthoFinder output from all 47 species
LOC_Os04g58980.1 LOC_Os04g58980 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
LOC_Os06g39650.1 LOC_Os06g39650 Pentatricopeptide repeat-containing protein At1g31430... 0.03 OrthoFinder output from all 47 species
LOC_Os09g07780.1 OTP84, LOC_Os09g07780 Pentatricopeptide repeat-containing protein At3g57430,... 0.03 OrthoFinder output from all 47 species
Len_g02415 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g05006 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05723 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05734 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06094 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g06666 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g06695 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g06749 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07095 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g07121 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g07131 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07396 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07431 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07688 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07808 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g11894 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g14541 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g15174 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g15222 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g23499 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g30026 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g31355 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g33282 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_38395g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
MA_53781g0010 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
MA_863836g0010 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.03 OrthoFinder output from all 47 species
MA_8893194g0010 MEF1 RNA editing factor (MEF1) 0.03 OrthoFinder output from all 47 species
MA_9354530g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
Msp_g07379 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g13974 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g15490 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g17296 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g25984 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g38509 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g15698 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g09916 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g12878 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g13275 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g56906 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57212 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57986 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g63870 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g65497 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g20514 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g08795 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g14586 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g16324 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g22081 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g40056 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g41022 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g41679 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g42008 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g42119 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g43104 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g48448 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g53363 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g53559 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53560 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g53925 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g53966 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g56129 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g59322 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g61267 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g06304 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g091610.1.1 Solyc01g091610 Pentatricopeptide repeat-containing protein At2g27610... 0.03 OrthoFinder output from all 47 species
Solyc02g065410.3.1 CRR22, Solyc02g065410 Pentatricopeptide repeat-containing protein At1g20230... 0.03 OrthoFinder output from all 47 species
Solyc07g006990.3.1 Solyc07g006990 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Solyc07g009220.2.1 Solyc07g009220 Pentatricopeptide repeat-containing protein At2g34400... 0.03 OrthoFinder output from all 47 species
Solyc09g010070.1.1 EMB2758, Solyc09g010070 Pentatricopeptide repeat-containing protein At4g33990... 0.03 OrthoFinder output from all 47 species
Spa_g08793 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g12610 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g13785 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g13872 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g22621 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g24963 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g26573 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g33733 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g41043 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g47084 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06065 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06419 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g19943 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g23009 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g34840 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e005246_P001 Zm00001e005246 Pentatricopeptide repeat-containing protein At2g41080... 0.03 OrthoFinder output from all 47 species
Zm00001e007600_P001 Zm00001e007600 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Zm00001e010837_P001 LPA66, Zm00001e010837 Pentatricopeptide repeat-containing protein At5g48910... 0.03 OrthoFinder output from all 47 species
Zm00001e013166_P001 Zm00001e013166 Pentatricopeptide repeat-containing protein At4g14820... 0.03 OrthoFinder output from all 47 species
Zm00001e018565_P001 Zm00001e018565 Pentatricopeptide repeat-containing protein At3g13880... 0.03 OrthoFinder output from all 47 species
Zm00001e019482_P001 Zm00001e019482 Pentatricopeptide repeat-containing protein At5g48910... 0.03 OrthoFinder output from all 47 species
Zm00001e030553_P001 Zm00001e030553 Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
Zm00001e037600_P001 Zm00001e037600 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030976 thiamine pyrophosphate binding IEP HCCA
MF GO:0050997 quaternary ammonium group binding IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 300 323
IPR002885 Pentatricopeptide_repeat 199 222
IPR002885 Pentatricopeptide_repeat 99 122
IPR002885 Pentatricopeptide_repeat 27 53
IPR002885 Pentatricopeptide_repeat 325 372
IPR002885 Pentatricopeptide_repeat 124 170
IPR002885 Pentatricopeptide_repeat 225 263
No external refs found!