AT5G01830


Description : ARM repeat superfamily protein


Gene families : OG_01_0000227 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000227_tree ,
OG_02_0000690 (LandPlants) Phylogenetic Tree(s): OG_02_0000690_tree ,
OG_03_0001289 (SeedPlants) Phylogenetic Tree(s): OG_03_0001289_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G01830
Cluster HCCA: Cluster_248

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00217990 evm_27.TU.AmTr_v1... U-box domain-containing protein 16 OS=Arabidopsis thaliana 0.05 Archaeplastida
AMTR_s00072p00171260 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
AMTR_s00153p00035720 evm_27.TU.AmTr_v1... U-box domain-containing protein 1 OS=Medicago truncatula 0.03 Archaeplastida
AT1G23030 No alias ARM repeat superfamily protein 0.04 Archaeplastida
AT5G42340 PUB15 Plant U-Box 15 0.03 Archaeplastida
Gb_10627 No alias U-box domain-containing protein 13 OS=Arabidopsis... 0.03 Archaeplastida
Gb_13754 No alias E3 ubiquitin ligase (PUB) 0.03 Archaeplastida
Gb_29276 No alias E3 ubiquitin ligase (PUB) 0.03 Archaeplastida
LOC_Os02g13960.1 No alias U-box domain-containing protein 4 OS=Oryza sativa subsp.... 0.05 Archaeplastida
LOC_Os05g39930.1 No alias U-box domain-containing protein 16 OS=Arabidopsis... 0.03 Archaeplastida
LOC_Os06g51130.1 No alias U-box domain-containing protein 15 OS=Arabidopsis... 0.03 Archaeplastida
LOC_Os08g37570.1 No alias U-box domain-containing protein 15 OS=Arabidopsis... 0.03 Archaeplastida
MA_9917294g0010 No alias E3 ubiquitin ligase (PUB) 0.03 Archaeplastida
Pp3c10_4480V3.1 No alias plant U-box 13 0.03 Archaeplastida
Pp3c9_17047V3.1 No alias plant U-box 13 0.04 Archaeplastida
Smo75609 No alias U-box domain-containing protein 1 OS=Medicago truncatula 0.03 Archaeplastida
Solyc02g072080.1.1 No alias U-box domain-containing protein 17 OS=Arabidopsis... 0.03 Archaeplastida
Solyc11g008390.2.1 No alias E3 ubiquitin ligase (PUB) 0.03 Archaeplastida
Solyc11g066040.2.1 No alias E3 ubiquitin ligase (PUB) 0.03 Archaeplastida
Zm00001e019429_P001 No alias U-box domain-containing protein 16 OS=Arabidopsis... 0.03 Archaeplastida
Zm00001e028839_P001 No alias U-box domain-containing protein 16 OS=Arabidopsis... 0.07 Archaeplastida
Zm00001e036734_P001 No alias E3 ubiquitin ligase (PUB) 0.03 Archaeplastida
AMTR_s00007p00217990 evm_27.TU.AmTr_v1... U-box domain-containing protein 16 OS=Arabidopsis thaliana 0.04 LandPlants
AMTR_s00153p00035720 evm_27.TU.AmTr_v1... U-box domain-containing protein 1 OS=Medicago truncatula 0.03 LandPlants
MA_365628g0010 No alias no hits & (original description: none) 0.02 LandPlants
Zm00001e028839_P001 No alias U-box domain-containing protein 16 OS=Arabidopsis... 0.05 LandPlants
AMTR_s00007p00217990 evm_27.TU.AmTr_v1... U-box domain-containing protein 16 OS=Arabidopsis thaliana 0.02 SeedPlants
MA_365628g0010 No alias no hits & (original description: none) 0.02 SeedPlants
Zm00001e028839_P001 No alias U-box domain-containing protein 16 OS=Arabidopsis... 0.04 SeedPlants

Type GO Term Name Evidence Source
BP GO:0010200 response to chitin IEP Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003613 Ubox_domain 274 345
IPR000225 Armadillo 402 437
No external refs found!