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  5. Pir_g02549

Pir_g02549


Description : not classified & original description: none


Gene families : OG0000185 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000185_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g02549

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00033p00116200 evm_27.TU.AmTr_v1... KH domain-containing protein HEN4 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Adi_g110289 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g03920 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g11460 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g03129 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g04404 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g17642 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g24288 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g11897 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g24061 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g18057 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01012514001 HEN4 KH domain-containing protein HEN4 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Len_g36497 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_12604g0010 No alias RNA-binding KH domain-containing protein RCF3... 0.02 OrthoFinder output from all 47 species
MA_3715g0020 No alias RNA-binding KH domain-containing protein RCF3... 0.03 OrthoFinder output from all 47 species
Msp_g10485 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g01260 No alias regulatory protein *(RCF3) of HYL1-phosphorylation &... 0.02 OrthoFinder output from all 47 species
Sam_g13844 No alias regulatory protein *(RCF3) of HYL1-phosphorylation &... 0.02 OrthoFinder output from all 47 species
Solyc05g007810.3.1 Solyc05g007810 RNA-binding KH domain-containing protein RCF3... 0.02 OrthoFinder output from all 47 species
Solyc12g055780.3.1 Solyc12g055780 RNA-binding KH domain-containing protein RCF3... 0.03 OrthoFinder output from all 47 species
Spa_g53383 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0043461 proton-transporting ATP synthase complex assembly IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0070071 proton-transporting two-sector ATPase complex assembly IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
InterPro domains Description Start Stop
IPR004088 KH_dom_type_1 48 104
IPR004088 KH_dom_type_1 397 463
IPR004088 KH_dom_type_1 309 361
IPR004088 KH_dom_type_1 138 204
No external refs found!