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  5. Pir_g02465

Pir_g02465


Description : component *(WDR5/SWD3) of COMPASS histone trimethylation complex & original description: none


Gene families : OG0001739 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001739_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g02465
Cluster HCCA: Cluster_236

Target Alias Description ECC score Gene Family Method Actions
Aob_g01249 No alias component *(WDR5/SWD3) of COMPASS histone trimethylation... 0.02 OrthoFinder output from all 47 species
Cre08.g367650 No alias Chromatin organisation.histone modifications.histone... 0.02 OrthoFinder output from all 47 species
Dac_g03179 No alias component *(WDR5/SWD3) of COMPASS histone trimethylation... 0.03 OrthoFinder output from all 47 species
Dcu_g06819 No alias component *(WDR5/SWD3) of COMPASS histone trimethylation... 0.03 OrthoFinder output from all 47 species
Zm00001e005534_P002 Zm00001e005534 component WDR5 of COMPASS histone trimethylation complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000149 SNARE binding IEP HCCA
BP GO:0000723 telomere maintenance IEP HCCA
MF GO:0003678 DNA helicase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0017056 structural constituent of nuclear pore IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0019905 syntaxin binding IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0031625 ubiquitin protein ligase binding IEP HCCA
BP GO:0032200 telomere organization IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
MF GO:0044389 ubiquitin-like protein ligase binding IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 183 221
IPR001680 WD40_repeat 272 309
IPR001680 WD40_repeat 225 266
IPR001680 WD40_repeat 98 136
IPR001680 WD40_repeat 140 178
IPR001680 WD40_repeat 57 94
IPR001680 WD40_repeat 15 52
No external refs found!