AT5G01520


Description : RING/U-box superfamily protein


Gene families : OG_01_0001188 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001188_tree ,
OG_02_0001068 (LandPlants) Phylogenetic Tree(s): OG_02_0001068_tree ,
OG_03_0000881 (SeedPlants) Phylogenetic Tree(s): OG_03_0000881_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G01520
Cluster HCCA: Cluster_52

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01010297001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
GSVIVT01024747001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
LOC_Os04g58320.2 No alias RING-HC-class E3 ligase 0.03 Archaeplastida
Mp6g12970.1 No alias RING-HC-class E3 ligase 0.02 Archaeplastida
Pp3c3_21640V3.1 No alias RING/U-box superfamily protein 0.02 Archaeplastida
Pp3c4_24440V3.1 No alias RING/U-box superfamily protein 0.02 Archaeplastida
Smo105758 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
Solyc05g014250.3.1 No alias RING-HC-class E3 ligase 0.03 Archaeplastida
Solyc10g009020.3.1 No alias RING-HC-class E3 ligase 0.04 Archaeplastida
Zm00001e004460_P001 No alias RING-HC-class E3 ligase 0.03 Archaeplastida
GSVIVT01002021001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 LandPlants
GSVIVT01010297001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 LandPlants
Mp6g12970.1 No alias RING-HC-class E3 ligase 0.02 LandPlants
Solyc02g078460.3.1 No alias RING-HC-class E3 ligase 0.02 LandPlants
Solyc10g009020.3.1 No alias RING-HC-class E3 ligase 0.03 LandPlants
Zm00001e004460_P001 No alias RING-HC-class E3 ligase 0.03 LandPlants
Zm00001e010920_P002 No alias RING-HC-class E3 ligase 0.02 LandPlants
GSVIVT01002021001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 SeedPlants
Solyc02g078460.3.1 No alias RING-HC-class E3 ligase 0.02 SeedPlants
Zm00001e004460_P001 No alias RING-HC-class E3 ligase 0.03 SeedPlants
Zm00001e010920_P002 No alias RING-HC-class E3 ligase 0.02 SeedPlants

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
CC GO:0005829 cytosol IDA Interproscan
MF GO:0008270 zinc ion binding ISS Interproscan
BP GO:0015996 chlorophyll catabolic process RCA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!