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  5. Pir_g02279

Pir_g02279 (AtTMN7, TMN7)


Aliases : AtTMN7, TMN7

Description : not classified & original description: none


Gene families : OG0001040 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001040_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g02279
Cluster HCCA: Cluster_268

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00065p00212630 evm_27.TU.AmTr_v1... Transmembrane 9 superfamily member 8 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Adi_g057397 AtTMN7, TMN7 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g09121 AtTMN7, TMN7 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g39183 AtTMN7, TMN7 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g03456 AtTMN7, TMN7 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g04390 AtTMN7, TMN7 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g59238 AtTMN7, TMN7 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.13G093100.1 AtTMN7, TMN7,... not classified & original description: pacid=50636593... 0.03 OrthoFinder output from all 47 species
Cre10.g439850 AtTMN7, TMN7 Transmembrane 9 superfamily member 7 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Dac_g03388 AtTMN7, TMN7 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01035970001 No alias Transmembrane 9 superfamily member 9 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Gb_26109 AtTMN7, TMN7 Transmembrane 9 superfamily member 7 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
LOC_Os09g38530.1 LOC_Os09g38530 Transmembrane 9 superfamily member 10 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Len_g23868 AtTMN7, TMN7 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Mp4g15200.1 AtTMN7, TMN7 Transmembrane 9 superfamily member 7 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Ore_g08381 AtTMN7, TMN7 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0057.g014690 AtTMN7, TMN7 B-G-class Rab-GDF protein & original description: CDS=62-1972 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0057.g014717 AtTMN7, TMN7 not classified & original description: CDS=114-2033 0.05 OrthoFinder output from all 47 species
Sam_g29819 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc07g005600.4.1 Solyc07g005600 Transmembrane 9 superfamily member 9 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Spa_g15974 AtTMN7, TMN7 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06054 AtTMN7, TMN7 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g12329 AtTMN7, TMN7 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e039875_P001 Zm00001e039875 Transmembrane 9 superfamily member 10 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005839 proteasome core complex IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR004240 EMP70 55 598
No external refs found!