AT5G01380


Description : Homeodomain-like superfamily protein


Gene families : OG_01_0002363 (Archaeplastida) Phylogenetic Tree(s): OG_01_0002363_tree ,
OG_02_0001555 (LandPlants) Phylogenetic Tree(s): OG_02_0001555_tree ,
OG_03_0002578 (SeedPlants) Phylogenetic Tree(s): OG_03_0002578_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G01380
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
AT2G38250 No alias Homeodomain-like superfamily protein 0.03 Archaeplastida
GSVIVT01036939001 No alias RNA biosynthesis.transcriptional activation.Trihelix... 0.01 Archaeplastida
Gb_20046 No alias transcription factor (Trihelix) 0.04 Archaeplastida
LOC_Os05g03740.1 No alias transcription factor (Trihelix) 0.02 Archaeplastida
Pp3c19_12520V3.1 No alias Homeodomain-like superfamily protein 0.02 Archaeplastida
Pp3c22_23130V3.1 No alias Homeodomain-like superfamily protein 0.02 Archaeplastida
Solyc09g005560.4.1 No alias transcription factor (Trihelix) 0.07 Archaeplastida
GSVIVT01036939001 No alias RNA biosynthesis.transcriptional activation.Trihelix... 0.01 LandPlants
Gb_20046 No alias transcription factor (Trihelix) 0.03 LandPlants
LOC_Os05g03740.1 No alias transcription factor (Trihelix) 0.02 LandPlants
Solyc09g005560.4.1 No alias transcription factor (Trihelix) 0.05 LandPlants
Solyc09g005560.4.1 No alias transcription factor (Trihelix) 0.03 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
MF GO:0005515 protein binding IPI Interproscan
CC GO:0005634 nucleus IDA Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006355 regulation of transcription, DNA-templated RCA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated TAS Interproscan
BP GO:0009407 toxin catabolic process RCA Interproscan
BP GO:0010583 response to cyclopentenone RCA Interproscan
MF GO:0042802 identical protein binding IPI Interproscan
MF GO:0043565 sequence-specific DNA binding IDA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!