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  5. Pir_g02192

Pir_g02192


Description : regulatory protein *(KHZ) of autonomous floral-promotion pathway & original description: none


Gene families : OG0000799 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000799_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g02192

Target Alias Description ECC score Gene Family Method Actions
AT5G06770 No alias KH domain-containing protein / zinc finger (CCCH type)... 0.03 OrthoFinder output from all 47 species
Adi_g020339 No alias regulatory protein *(KHZ) of autonomous floral-promotion... 0.04 OrthoFinder output from all 47 species
Adi_g036602 No alias regulatory protein *(KHZ) of autonomous floral-promotion... 0.02 OrthoFinder output from all 47 species
Adi_g077563 No alias regulatory protein *(KHZ) of autonomous floral-promotion... 0.02 OrthoFinder output from all 47 species
Aev_g09670 No alias regulatory protein *(KHZ) of autonomous floral-promotion... 0.03 OrthoFinder output from all 47 species
Als_g20784 No alias regulatory protein *(KHZ) of autonomous floral-promotion... 0.03 OrthoFinder output from all 47 species
Dcu_g19603 No alias regulatory protein *(KHZ) of autonomous floral-promotion... 0.05 OrthoFinder output from all 47 species
Pnu_g09383 No alias regulatory protein *(KHZ) of autonomous floral-promotion... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g000910 No alias regulatory protein *(KHZ) of autonomous floral-promotion... 0.03 OrthoFinder output from all 47 species
Solyc10g078750.2.1 Solyc10g078750 C3H zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Spa_g23123 No alias regulatory protein *(KHZ) of autonomous floral-promotion... 0.03 OrthoFinder output from all 47 species
Tin_g12486 No alias regulatory protein *(KHZ) of autonomous floral-promotion... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
BP GO:0009966 regulation of signal transduction IEP HCCA
BP GO:0010646 regulation of cell communication IEP HCCA
BP GO:0023051 regulation of signaling IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
InterPro domains Description Start Stop
IPR004088 KH_dom_type_1 223 285
IPR000571 Znf_CCCH 305 330
No external refs found!