Aliases : RUB1, ATRUB1, NEDD8
Description : RUB ubiquitin-fold protein & original description: none
Gene families : OG0000054 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT1G31340 | RUB1, ATRUB1, NEDD8 | related to ubiquitin 1 | 0.02 | OrthoFinder output from all 47 species | |
AT4G05050 | UBQ11 | ubiquitin 11 | 0.03 | OrthoFinder output from all 47 species | |
Adi_g023730 | No alias | component *(eL40) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
Adi_g052036 | UBQ6 | component *(eS31) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
Adi_g068276 | UBQ11 | UBQ ubiquitin-fold protein & original description: none | 0.01 | OrthoFinder output from all 47 species | |
Aop_g09130 | RUB1, ATRUB1, NEDD8 | RUB ubiquitin-fold protein & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Aop_g12224 | No alias | component *(eL40) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00000144.76 | UBQ7, RUB2 | Protein degradation.peptide tagging.Related-to-Ubiquitin... | 0.01 | OrthoFinder output from all 47 species | |
GSVIVT01023471001 | UBQ10 | Protein degradation.peptide tagging.Ubiquitin... | 0.01 | OrthoFinder output from all 47 species | |
Gb_30150 | RUB1, ATRUB1, NEDD8 | ubiquitin-fold protein (RUB) | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os08g08760.1 | LOC_Os08g08760 | Polyubiquitin 3 OS=Oryza sativa subsp. japonica... | 0.02 | OrthoFinder output from all 47 species | |
Lfl_g27408 | UBQ11 | UBQ ubiquitin-fold protein & original description: none | 0.01 | OrthoFinder output from all 47 species | |
MA_6985771g0010 | No alias | Ubiquitin-40S ribosomal protein S27a OS=Hordeum vulgare... | 0.01 | OrthoFinder output from all 47 species | |
Mp6g03960.1 | UBQ4 | ubiquitin-fold protein (UBQ) | 0.02 | OrthoFinder output from all 47 species | |
Mp7g14690.1 | UBQ6 | component RPS27a of SSU proteome | 0.01 | OrthoFinder output from all 47 species | |
Msp_g06697 | No alias | component *(eL40) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
Tin_g03631 | UBQ6 | component *(eS31) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
Tin_g05310 | No alias | component *(eL40) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005515 | protein binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
MF | GO:0003723 | RNA binding | IEP | HCCA |
MF | GO:0005543 | phospholipid binding | IEP | HCCA |
CC | GO:0005741 | mitochondrial outer membrane | IEP | HCCA |
BP | GO:0006508 | proteolysis | IEP | HCCA |
BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | HCCA |
BP | GO:0006810 | transport | IEP | HCCA |
BP | GO:0007034 | vacuolar transport | IEP | HCCA |
MF | GO:0008289 | lipid binding | IEP | HCCA |
BP | GO:0009056 | catabolic process | IEP | HCCA |
BP | GO:0009057 | macromolecule catabolic process | IEP | HCCA |
MF | GO:0009916 | alternative oxidase activity | IEP | HCCA |
MF | GO:0016462 | pyrophosphatase activity | IEP | HCCA |
MF | GO:0016679 | oxidoreductase activity, acting on diphenols and related substances as donors | IEP | HCCA |
MF | GO:0016682 | oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor | IEP | HCCA |
MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | HCCA |
MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | HCCA |
MF | GO:0016887 | ATP hydrolysis activity | IEP | HCCA |
MF | GO:0017111 | ribonucleoside triphosphate phosphatase activity | IEP | HCCA |
CC | GO:0019867 | outer membrane | IEP | HCCA |
MF | GO:0019899 | enzyme binding | IEP | HCCA |
BP | GO:0019941 | modification-dependent protein catabolic process | IEP | HCCA |
CC | GO:0031090 | organelle membrane | IEP | HCCA |
MF | GO:0031625 | ubiquitin protein ligase binding | IEP | HCCA |
CC | GO:0031966 | mitochondrial membrane | IEP | HCCA |
CC | GO:0031968 | organelle outer membrane | IEP | HCCA |
MF | GO:0032182 | ubiquitin-like protein binding | IEP | HCCA |
MF | GO:0035091 | phosphatidylinositol binding | IEP | HCCA |
MF | GO:0043130 | ubiquitin binding | IEP | HCCA |
BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | HCCA |
BP | GO:0044248 | cellular catabolic process | IEP | HCCA |
BP | GO:0044265 | cellular macromolecule catabolic process | IEP | HCCA |
MF | GO:0044389 | ubiquitin-like protein ligase binding | IEP | HCCA |
BP | GO:0046907 | intracellular transport | IEP | HCCA |
BP | GO:0051179 | localization | IEP | HCCA |
BP | GO:0051234 | establishment of localization | IEP | HCCA |
BP | GO:0051603 | proteolysis involved in protein catabolic process | IEP | HCCA |
BP | GO:0051641 | cellular localization | IEP | HCCA |
BP | GO:0051649 | establishment of localization in cell | IEP | HCCA |
MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
CC | GO:0098588 | bounding membrane of organelle | IEP | HCCA |
MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
BP | GO:1901575 | organic substance catabolic process | IEP | HCCA |
No external refs found! |