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  5. Pir_g02005

Pir_g02005 (ATRDRP1, RDR1)


Aliases : ATRDRP1, RDR1

Description : not classified & original description: none


Gene families : OG0001039 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001039_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g02005

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene25333.t1 ATRDRP1, RDR1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene33144.t2 ATRDRP1, RDR1,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020816.45 No alias No description available 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020904.19 SMD1, RDR2 Probable RNA-dependent RNA polymerase 2 OS=Oryza sativa... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003968 RNA-dependent RNA polymerase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009314 response to radiation IEP HCCA
BP GO:0009416 response to light stimulus IEP HCCA
BP GO:0009581 detection of external stimulus IEP HCCA
BP GO:0009582 detection of abiotic stimulus IEP HCCA
BP GO:0009583 detection of light stimulus IEP HCCA
BP GO:0009584 detection of visible light IEP HCCA
BP GO:0009605 response to external stimulus IEP HCCA
BP GO:0009628 response to abiotic stimulus IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
CC GO:0016459 myosin complex IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0051606 detection of stimulus IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR007855 RNA-dep_RNA_pol_euk-typ 412 995
No external refs found!