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  5. Pir_g01995

Pir_g01995


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g01995

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00056p00185560 VAC1, ECB2, ATECB2 RNA processing.organelle machineries.RNA... 0.03 OrthoFinder output from all 47 species
AMTR_s00062p00213230 No alias Pentatricopeptide repeat-containing protein At3g09040,... 0.02 OrthoFinder output from all 47 species
AMTR_s00098p00155650 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g39350... 0.03 OrthoFinder output from all 47 species
AT2G36980 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT3G08820 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.01 OrthoFinder output from all 47 species
AT5G43790 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G44230 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g101053 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g07273 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aev_g24191 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g12581 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g23769 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g24046 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Als_g04425 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g06108 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g06363 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g08105 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18796 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19046 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19114 EMB2261 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g27948 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g30874 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g26977 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27256 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g27890 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27914 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g28645 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g34282 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g36681 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g36888 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g37980 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g40645 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g42783 DOT4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g03193 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g09162 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g26341 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene72928.t1 Aspi01Gene72928 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0001.g000440 OTP84 not classified & original description: CDS=1-2304 0.02 OrthoFinder output from all 47 species
Azfi_s0002.g001614 No alias not classified & original description: CDS=1-2595 0.02 OrthoFinder output from all 47 species
Azfi_s0004.g008781 No alias not classified & original description: CDS=1-2346 0.02 OrthoFinder output from all 47 species
Azfi_s0005.g009353 No alias not classified & original description: CDS=1-2883 0.02 OrthoFinder output from all 47 species
Azfi_s0095.g043572 No alias not classified & original description: CDS=1-2958 0.03 OrthoFinder output from all 47 species
Azfi_s0221.g058728 OTP86 not classified & original description: CDS=1-2394 0.02 OrthoFinder output from all 47 species
Azfi_s0373.g067166 No alias not classified & original description: CDS=1-2166 0.02 OrthoFinder output from all 47 species
Azfi_s0444.g070606 No alias not classified & original description: CDS=1-2982 0.03 OrthoFinder output from all 47 species
Azfi_s1396.g102567 No alias not classified & original description: CDS=1-1371 0.01 OrthoFinder output from all 47 species
Cba_g02717 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g04081 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g06504 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g17225 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g19308 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g20751 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20848 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g29697 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g29878 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g34331 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g36659 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g42618 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67804 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g77187 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.01G121800.1 Ceric.01G121800 not classified & original description: pacid=50593016... 0.01 OrthoFinder output from all 47 species
Ceric.1Z239000.1 Ceric.1Z239000 not classified & original description: pacid=50639198... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001130.28 No alias No description available 0.01 OrthoFinder output from all 47 species
Dcu_g06287 CRR2 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g07768 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g47766 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g21331 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g25800 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g26029 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g26041 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g15996 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g16748 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g22835 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g26389 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os04g43430.2 LOC_Os04g43430 RNA editing factor (MEF12) 0.02 OrthoFinder output from all 47 species
LOC_Os07g20420.1 LOC_Os07g20420 Pentatricopeptide repeat-containing protein At3g26782,... 0.02 OrthoFinder output from all 47 species
LOC_Os07g39090.1 LOC_Os07g39090 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Len_g19011 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g19012 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Len_g34158 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g44108 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g54971 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g58985 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g28067 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g40602 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g05274 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g12146 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g17701 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g19490 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g28102 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g41366 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g19044 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g15676 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g33469 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g31933 REME1 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pnu_g12166 OTP82 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g15455 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pnu_g23109 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g30285 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c6_28980V3.1 Pp3c6_28980 organellar single-stranded DNA binding protein 3 0.01 OrthoFinder output from all 47 species
Ppi_g03881 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g05179 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g05243 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g06328 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g07560 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g07606 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g14613 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g15400 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g21699 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g32992 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g36024 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g41361 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0092.g018986 No alias not classified & original description: CDS=1-1941 0.02 OrthoFinder output from all 47 species
Sam_g13564 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g14712 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g28003 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g37508 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g39953 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g50214 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo131170 VAC1, ECB2, ATECB2 Pentatricopeptide repeat-containing protein At4g13650... 0.02 OrthoFinder output from all 47 species
Smo172234 No alias Pentatricopeptide repeat-containing protein At4g14050,... 0.02 OrthoFinder output from all 47 species
Smo92610 No alias Pentatricopeptide repeat-containing protein At5g56310... 0.02 OrthoFinder output from all 47 species
Smo96927 EMB2758 Pentatricopeptide repeat-containing protein At3g24000,... 0.02 OrthoFinder output from all 47 species
Solyc01g108180.4.1 Solyc01g108180 RNA editing factor (MEF8). RNA editing factor (BLX) 0.04 OrthoFinder output from all 47 species
Solyc07g005850.3.1 Solyc07g005850 Pentatricopeptide repeat-containing protein At4g30700... 0.02 OrthoFinder output from all 47 species
Solyc07g008480.3.1 Solyc07g008480 Pentatricopeptide repeat-containing protein At3g14730... 0.03 OrthoFinder output from all 47 species
Solyc12g099850.1.1 Solyc12g099850 Pentatricopeptide repeat-containing protein At1g18485... 0.02 OrthoFinder output from all 47 species
Spa_g09360 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g14725 MEF21 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g23704 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g04710 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g30551 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g32155 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g39845 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e040855_P003 Zm00001e040855 Pentatricopeptide repeat-containing protein At2g37320... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP HCCA
CC GO:0000178 exosome (RNase complex) IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP HCCA
MF GO:0004751 ribose-5-phosphate isomerase activity IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP HCCA
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP HCCA
BP GO:0006417 regulation of translation IEP HCCA
BP GO:0006448 regulation of translational elongation IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0010608 post-transcriptional regulation of gene expression IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP HCCA
BP GO:0017182 peptidyl-diphthamide metabolic process IEP HCCA
BP GO:0017183 peptidyl-diphthamide biosynthetic process from peptidyl-histidine IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018202 peptidyl-histidine modification IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034248 regulation of amide metabolic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
MF GO:0090560 2-(3-amino-3-carboxypropyl)histidine synthase activity IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
BP GO:1900247 regulation of cytoplasmic translational elongation IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1905354 exoribonuclease complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR032867 DYW_dom 839 918
IPR002885 Pentatricopeptide_repeat 507 553
IPR002885 Pentatricopeptide_repeat 405 452
IPR002885 Pentatricopeptide_repeat 305 352
IPR002885 Pentatricopeptide_repeat 608 655
IPR002885 Pentatricopeptide_repeat 279 304
IPR002885 Pentatricopeptide_repeat 481 503
IPR002885 Pentatricopeptide_repeat 206 232
No external refs found!