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  5. Pir_g01938

Pir_g01938


Description : not classified & original description: none


Gene families : OG0000756 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000756_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g01938

Target Alias Description ECC score Gene Family Method Actions
Aop_g13516 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.39G036600.1 Ceric.39G036600 not classified & original description: pacid=50583070... 0.01 OrthoFinder output from all 47 species
Dac_g20291 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g18196 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g32474 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0020.g008144 No alias not classified & original description: CDS=1-1644 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000178 exosome (RNase complex) IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1905354 exoribonuclease complex IEP HCCA
InterPro domains Description Start Stop
IPR001251 CRAL-TRIO_dom 313 470
IPR011074 CRAL/TRIO_N_dom 251 288
No external refs found!