Smo25849 (PACid_15402186)


Aliases : PACid_15402186

Description : 33.99 development.unspecified senescence-associated gene 29 (SAG29) LOCATED IN: endomembrane system, integral to membrane, membrane EXPRESSED IN: 13 plant structures EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage CONTAINS InterPro DOMAIN/s: MtN3/saliva-related transmembrane protein, conserved region (InterPro:IPR018169), RAG1-activating protein 1 homologue (InterPro:IPR018179), RAG1-activating protein-1-related (InterPro:IPR004316) BEST Arabidopsis thaliana protein match is: homolog of Medicago truncatula MTN3 (TAIR:AT5G23660.1) Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0 Bacteria - 0 Metazoa - 736 Fungi - 347 Plants - 385 Viruses - 0 Other Eukaryotes - 339 (source: NCBI BLink). (original description: no original description)'


Gene families : OG_01_0000032 (Gene family) Phylogenetic Tree(s): OG0000032_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Smo25849
Cluster HCCA cluster: Cluster_72

Target Alias Description ECC score Gene Family Method Actions
AT2G39060 SWEET9, AtSWEET9 Nodulin MtN3 family protein 0.02 Gene family
AT3G28007 AtSWEET4, SWEET4 Nodulin MtN3 family protein 0.03 Gene family
AT5G53190 SWEET3, AtSWEET3 Nodulin MtN3 family protein 0.02 Gene family
GSVIVT01014088001 No alias 33.99 development.unspecified Nodulin MtN3 family protein 0.02 Gene family
GSVIVT01031170001 No alias 33.99 development.unspecified Nodulin MtN3 family protein 0.03 Gene family
Solyc02g071520.3.1 Solyc02g071520.3 33.99 development.unspecified Nodulin MtN3 family protein 0.02 Gene family
Solyc03g007360.3.1 Solyc03g007360.3 33.99 development.unspecified Nodulin MtN3 family protein 0.02 Gene family
Solyc04g064610.3.1 Solyc04g064610.3 33.99 development.unspecified Nodulin MtN3 family protein 0.02 Gene family
Solyc04g064630.3.1 Solyc04g064630.3 33.99 development.unspecified Nodulin MtN3 family protein 0.02 Gene family
Solyc05g024260.3.1 Solyc05g024260.3 33.99 development.unspecified senescence-associated gene... 0.03 Gene family
Solyc06g060590.3.1 Solyc06g060590.3 33.99 development.unspecified Nodulin MtN3 family protein 0.04 Gene family
Zm00001d021064 GRMZM5G872141 33.99 development.unspecified Nodulin MtN3 family protein 0.03 Gene family
Zm00001d029098 GRMZM2G107597 33.99 development.unspecified Nodulin MtN3 family protein 0.03 Gene family
Zm00001d050577 GRMZM2G168365 33.99 development.unspecified senescence-associated gene... 0.02 Gene family

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR004316 SWEET_sugar_transpr 2 85
No external refs found!