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Description : ER tubulae formation factor *(RHD3/RL) & original description: none
Gene families : OG0001619 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001619_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00019p00244970 | evm_27.TU.AmTr_v1... | Protein ROOT HAIR DEFECTIVE 3 homolog 1 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00064p00178110 | RHD3,... | Protein ROOT HAIR DEFECTIVE 3 OS=Oryza sativa subsp. japonica | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g084107 | No alias | ER tubulae formation factor *(RHD3/RL) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Als_g33558 | No alias | ER tubulae formation factor *(RHD3/RL) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene41089.t1 | Aspi01Gene41089 | ER tubulae formation factor *(RHD3/RL) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g37183 | No alias | ER tubulae formation factor *(RHD3/RL) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00021464.37 | RHD3 | Protein ROOT HAIR DEFECTIVE 3 OS=Oryza sativa subsp. japonica | 0.01 | OrthoFinder output from all 47 species | |
| Cre10.g439600 | RHD3 | Protein ROOT HAIR DEFECTIVE 3 OS=Arabidopsis thaliana | 0.01 | OrthoFinder output from all 47 species | |
| GSVIVT01016855001 | No alias | Protein ROOT HAIR DEFECTIVE 3 homolog 1 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| Gb_27309 | RHD3 | ER tubulae formation factor (RHD3/RL) | 0.02 | OrthoFinder output from all 47 species | |
| Gb_39091 | No alias | ER tubulae formation factor (RHD3/RL) | 0.05 | OrthoFinder output from all 47 species | |
| Len_g08736 | No alias | ER tubulae formation factor *(RHD3/RL) & original... | 0.03 | OrthoFinder output from all 47 species | |
| MA_10428984g0020 | RHD3 | ER tubulae formation factor (RHD3/RL) | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g06667 | No alias | ER tubulae formation factor *(RHD3/RL) & original... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0006553 | lysine metabolic process | IEP | HCCA |
| BP | GO:0008652 | amino acid biosynthetic process | IEP | HCCA |
| MF | GO:0008839 | 4-hydroxy-tetrahydrodipicolinate reductase | IEP | HCCA |
| BP | GO:0009066 | aspartate family amino acid metabolic process | IEP | HCCA |
| BP | GO:0009067 | aspartate family amino acid biosynthetic process | IEP | HCCA |
| BP | GO:0009085 | lysine biosynthetic process | IEP | HCCA |
| BP | GO:0009089 | lysine biosynthetic process via diaminopimelate | IEP | HCCA |
| MF | GO:0016491 | oxidoreductase activity | IEP | HCCA |
| MF | GO:0016627 | oxidoreductase activity, acting on the CH-CH group of donors | IEP | HCCA |
| MF | GO:0016628 | oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor | IEP | HCCA |
| BP | GO:0043648 | dicarboxylic acid metabolic process | IEP | HCCA |
| BP | GO:0046451 | diaminopimelate metabolic process | IEP | HCCA |
| BP | GO:1901605 | alpha-amino acid metabolic process | IEP | HCCA |
| BP | GO:1901607 | alpha-amino acid biosynthetic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR046758 | Sey1/RHD3-like_3HB | 322 | 767 |
| No external refs found! |