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  5. Pir_g01572

Pir_g01572


Description : not classified & original description: none


Gene families : OG0000642 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000642_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g01572

Target Alias Description ECC score Gene Family Method Actions
AT5G16840 BPA1 binding partner of acd11 1 0.02 OrthoFinder output from all 47 species
LOC_Os03g50560.1 LOC_Os03g50560 Binding partner of ACD11 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_25670g0010 No alias Binding partner of ACD11 1 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Pnu_g24542 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0045.g013208 No alias not classified & original description: CDS=23-751 0.03 OrthoFinder output from all 47 species
Sam_g07451 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc08g076530.3.1 Solyc08g076530 Binding partner of ACD11 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0005092 GDP-dissociation inhibitor activity IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0007264 small GTPase mediated signal transduction IEP HCCA
MF GO:0008198 ferrous iron binding IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
CC GO:0030119 AP-type membrane coat adaptor complex IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
CC GO:0044599 AP-5 adaptor complex IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 10 69
No external refs found!