AT4G39860


Description : unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G22270.1); Has 152 Blast hits to 146 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 146; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).


Gene families : OG_01_0001610 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001610_tree ,
OG_02_0001510 (LandPlants) Phylogenetic Tree(s): OG_02_0001510_tree ,
OG_03_0002036 (SeedPlants) Phylogenetic Tree(s): OG_03_0002036_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G39860
Cluster HCCA: Cluster_103

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00060p00180440 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
LOC_Os03g27010.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os04g38310.1 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10431601g0020 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_13107g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Mp1g05870.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc04g055160.3.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e040993_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os03g27010.1 No alias no hits & (original description: none) 0.03 LandPlants
LOC_Os04g38310.1 No alias no hits & (original description: none) 0.03 LandPlants
MA_10431601g0020 No alias no hits & (original description: none) 0.03 LandPlants
MA_13107g0010 No alias no hits & (original description: none) 0.02 LandPlants
Solyc04g055160.3.1 No alias no hits & (original description: none) 0.05 LandPlants
Zm00001e040993_P001 No alias no hits & (original description: none) 0.02 LandPlants
AMTR_s00060p00180440 evm_27.TU.AmTr_v1... No description available 0.02 SeedPlants
Gb_24849 No alias no hits & (original description: none) 0.02 SeedPlants
LOC_Os03g27010.1 No alias no hits & (original description: none) 0.03 SeedPlants
LOC_Os04g38310.1 No alias no hits & (original description: none) 0.03 SeedPlants
MA_10431601g0020 No alias no hits & (original description: none) 0.03 SeedPlants
MA_13107g0010 No alias no hits & (original description: none) 0.02 SeedPlants
Solyc04g055160.3.1 No alias no hits & (original description: none) 0.05 SeedPlants
Zm00001e040993_P001 No alias no hits & (original description: none) 0.02 SeedPlants

Type GO Term Name Evidence Source
BP GO:0000280 nuclear division RCA Interproscan
BP GO:0000911 cytokinesis by cell plate formation RCA Interproscan
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus IDA Interproscan
CC GO:0005634 nucleus ISM Interproscan
CC GO:0005737 cytoplasm IDA Interproscan
BP GO:0006342 chromatin silencing RCA Interproscan
BP GO:0007000 nucleolus organization RCA Interproscan
BP GO:0008150 biological_process ND Interproscan
BP GO:0008283 cell population proliferation RCA Interproscan
BP GO:0016572 histone phosphorylation RCA Interproscan
BP GO:0051567 histone H3-K9 methylation RCA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR025131 DUF4057 3 297
No external refs found!