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  5. Pir_g01338

Pir_g01338 (AFB2)


Aliases : AFB2

Description : substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB) & original description: none


Gene families : OG0000211 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000211_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g01338

Target Alias Description ECC score Gene Family Method Actions
AT5G49980 AFB5 auxin F-box protein 5 0.02 OrthoFinder output from all 47 species
Adi_g001615 COI1 component *(COI) of jasmonic acid receptor complex &... 0.02 OrthoFinder output from all 47 species
Aev_g03388 TIR1 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.02 OrthoFinder output from all 47 species
Ala_g07494 COI1 component *(COI) of jasmonic acid receptor complex &... 0.04 OrthoFinder output from all 47 species
Cba_g02651 COI1 component *(COI) of jasmonic acid receptor complex &... 0.03 OrthoFinder output from all 47 species
Cba_g03282 AFB2 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.02 OrthoFinder output from all 47 species
Cba_g17276 COI1 component *(COI) of jasmonic acid receptor complex &... 0.03 OrthoFinder output from all 47 species
Ehy_g01586 TIR1 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.03 OrthoFinder output from all 47 species
GSVIVT01003183001 TIR1 Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
Mp2g26590.1 COI1 component COI of jasmonic acid receptor complex 0.02 OrthoFinder output from all 47 species
Mp6g02750.1 TIR1 component TIR1/AFB of auxin receptor complex. component... 0.02 OrthoFinder output from all 47 species
Ppi_g05252 COI1 component *(COI) of jasmonic acid receptor complex &... 0.03 OrthoFinder output from all 47 species
Smo84100 COI1 Coronatine-insensitive protein 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR041567 COI1_F-box 43 81
IPR041101 Transp_inhibit 101 146
No external refs found!