Smo23881 (PACid_15418765)


Aliases : PACid_15418765

Description : 27.1.2 RNA.processing.RNA helicase Encodes a DEAD-box RNA helicase that localizes to mitochondria and is essential for regulating cell-to-cell transport via plasmodesmata. embryo defective 1586 (EMB1586) FUNCTIONS IN: RNA helicase activity INVOLVED IN: plasmodesma organization, plasmodesmata-mediated intercellular transport, embryo development ending in seed dormancy LOCATED IN: mitochondrion EXPRESSED IN: embryo, root, flower, shoot meristem CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021) BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT5G60990.1) Has 38833 Blast hits to 38121 proteins in 2993 species: Archae - 753 Bacteria - 18819 Metazoa - 5837 Fungi - 4441 Plants - 2445 Viruses - 12 Other Eukaryotes - 6526 (source: NCBI BLink). & (chl4|524964 : 165.0


Gene families : OG_01_0005036 (Gene family) Phylogenetic Tree(s): OG0005036_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Smo23881
Cluster HCCA cluster: Cluster_150


Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR011545 DEAD/DEAH_box_helicase_dom 23 198
No external refs found!