Aliases : HRT1, ATRBX1, RBX1, ROC1
Description : core component *(RBX1) of CULLIN-based E3 ubiquitin ligase complexes & original description: none
Gene families : OG0002121 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002121_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT5G20570 | HRT1, ATRBX1, RBX1, ROC1 | RING-box 1 | 0.02 | OrthoFinder output from all 47 species | |
Aop_g10185 | HRT1, ATRBX1, RBX1, ROC1 | core component *(RBX1) of CULLIN-based E3 ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00000792.7 | No alias | Protein degradation.peptide tagging.Related-to-Ubiquitin... | 0.02 | OrthoFinder output from all 47 species | |
Cre12.g543450 | No alias | Protein degradation.peptide tagging.Related-to-Ubiquitin... | 0.01 | OrthoFinder output from all 47 species | |
Dcu_g49763 | No alias | core component *(RBX1) of CULLIN-based E3 ubiquitin... | 0.02 | OrthoFinder output from all 47 species | |
Lfl_g29347 | No alias | core component *(RBX1) of CULLIN-based E3 ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
Mp4g09120.1 | HRT1, ATRBX1, RBX1, ROC1 | RUB ligase E3 protein (RBX1). UBQ-E2-recruiting... | 0.02 | OrthoFinder output from all 47 species | |
Msp_g38198 | No alias | core component *(RBX1) of CULLIN-based E3 ubiquitin... | 0.02 | OrthoFinder output from all 47 species | |
Nbi_g05531 | No alias | core component *(RBX1) of CULLIN-based E3 ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
Spa_g29676 | HRT1, ATRBX1, RBX1, ROC1 | core component *(RBX1) of CULLIN-based E3 ubiquitin... | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0008270 | zinc ion binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000049 | tRNA binding | IEP | HCCA |
MF | GO:0003712 | transcription coregulator activity | IEP | HCCA |
MF | GO:0003714 | transcription corepressor activity | IEP | HCCA |
MF | GO:0004843 | cysteine-type deubiquitinase activity | IEP | HCCA |
CC | GO:0005575 | cellular_component | IEP | HCCA |
CC | GO:0005667 | transcription regulator complex | IEP | HCCA |
CC | GO:0005741 | mitochondrial outer membrane | IEP | HCCA |
CC | GO:0005789 | endoplasmic reticulum membrane | IEP | HCCA |
BP | GO:0006508 | proteolysis | IEP | HCCA |
BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | HCCA |
BP | GO:0007275 | multicellular organism development | IEP | HCCA |
BP | GO:0008150 | biological_process | IEP | HCCA |
BP | GO:0008152 | metabolic process | IEP | HCCA |
BP | GO:0010035 | response to inorganic substance | IEP | HCCA |
BP | GO:0010038 | response to metal ion | IEP | HCCA |
CC | GO:0016020 | membrane | IEP | HCCA |
BP | GO:0016579 | protein deubiquitination | IEP | HCCA |
BP | GO:0019538 | protein metabolic process | IEP | HCCA |
MF | GO:0019783 | ubiquitin-like protein peptidase activity | IEP | HCCA |
CC | GO:0019867 | outer membrane | IEP | HCCA |
BP | GO:0019941 | modification-dependent protein catabolic process | IEP | HCCA |
MF | GO:0030170 | pyridoxal phosphate binding | IEP | HCCA |
CC | GO:0031090 | organelle membrane | IEP | HCCA |
CC | GO:0031966 | mitochondrial membrane | IEP | HCCA |
CC | GO:0031968 | organelle outer membrane | IEP | HCCA |
BP | GO:0032501 | multicellular organismal process | IEP | HCCA |
BP | GO:0032502 | developmental process | IEP | HCCA |
BP | GO:0042221 | response to chemical | IEP | HCCA |
BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | HCCA |
BP | GO:0044265 | cellular macromolecule catabolic process | IEP | HCCA |
BP | GO:0048856 | anatomical structure development | IEP | HCCA |
MF | GO:0070279 | vitamin B6 binding | IEP | HCCA |
BP | GO:0070646 | protein modification by small protein removal | IEP | HCCA |
CC | GO:0098588 | bounding membrane of organelle | IEP | HCCA |
MF | GO:0101005 | deubiquitinase activity | IEP | HCCA |
CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR024766 | Znf_RING_H2 | 50 | 108 |
No external refs found! |