AT4G39080 (VHA-A3)

Aliases : VHA-A3

Description : vacuolar proton ATPase A3

Gene families : OG_01_0001608 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001608_tree ,
OG_02_0001780 (LandPlants) Phylogenetic Tree(s): OG_02_0001780_tree ,
OG_03_0001727 (SeedPlants) Phylogenetic Tree(s): OG_03_0001727_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G39080
Cluster	HCCA: Cluster_139

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00000093.146	No alias	V-type proton ATPase subunit a2 OS=Arabidopsis thaliana	0.05	Archaeplastida
Cre04.g220350	No alias	Solute transport.primary active transport.V-type ATPase...	0.03	Archaeplastida
Cre09.g402500	No alias	Solute transport.primary active transport.V-type ATPase...	0.08	Archaeplastida
GSVIVT01024208001	No alias	Solute transport.primary active transport.V-type ATPase...	0.04	Archaeplastida
LOC_Os10g10500.1	No alias	subunit a of V-type ATPase membrane V0 subcomplex	0.04	Archaeplastida
Mp3g15140.1	No alias	subunit a of V-type ATPase membrane V0 subcomplex	0.11	Archaeplastida
Pp3c26_10750V3.1	No alias	vacuolar proton ATPase A3	0.04	Archaeplastida
Solyc01g110120.3.1	No alias	subunit a of V-type ATPase membrane V0 subcomplex	0.12	Archaeplastida
Solyc06g075400.3.1	No alias	subunit a of V-type ATPase membrane V0 subcomplex	0.03	Archaeplastida
Solyc11g072530.2.1	No alias	subunit a of V-type ATPase membrane V0 subcomplex	0.04	Archaeplastida
Zm00001e001056_P001	No alias	subunit a of V-type ATPase membrane V0 subcomplex	0.15	Archaeplastida
Zm00001e038568_P001	No alias	subunit a of V-type ATPase membrane V0 subcomplex	0.06	Archaeplastida
GSVIVT01024208001	No alias	Solute transport.primary active transport.V-type ATPase...	0.04	LandPlants
LOC_Os10g10500.1	No alias	subunit a of V-type ATPase membrane V0 subcomplex	0.04	LandPlants
Mp3g15140.1	No alias	subunit a of V-type ATPase membrane V0 subcomplex	0.08	LandPlants
Pp3c26_10750V3.1	No alias	vacuolar proton ATPase A3	0.03	LandPlants
Solyc01g110120.3.1	No alias	subunit a of V-type ATPase membrane V0 subcomplex	0.12	LandPlants
Solyc06g075400.3.1	No alias	subunit a of V-type ATPase membrane V0 subcomplex	0.03	LandPlants
Solyc11g072530.2.1	No alias	subunit a of V-type ATPase membrane V0 subcomplex	0.04	LandPlants
Zm00001e001056_P001	No alias	subunit a of V-type ATPase membrane V0 subcomplex	0.12	LandPlants
Zm00001e038568_P001	No alias	subunit a of V-type ATPase membrane V0 subcomplex	0.06	LandPlants
GSVIVT01024208001	No alias	Solute transport.primary active transport.V-type ATPase...	0.04	SeedPlants
LOC_Os10g10500.1	No alias	subunit a of V-type ATPase membrane V0 subcomplex	0.04	SeedPlants
MA_10429580g0010	No alias	no hits & (original description: none)	0.02	SeedPlants
Solyc01g110120.3.1	No alias	subunit a of V-type ATPase membrane V0 subcomplex	0.12	SeedPlants
Solyc06g075400.3.1	No alias	subunit a of V-type ATPase membrane V0 subcomplex	0.03	SeedPlants
Zm00001e001056_P001	No alias	subunit a of V-type ATPase membrane V0 subcomplex	0.12	SeedPlants
Zm00001e038568_P001	No alias	subunit a of V-type ATPase membrane V0 subcomplex	0.05	SeedPlants

Type	GO Term	Name	Evidence	Source
CC	GO:0000325	plant-type vacuole	IDA	Interproscan
BP	GO:0000902	cell morphogenesis	RCA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005215	transporter activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular anatomical structure	None	Extended
CC	GO:0005737	cytoplasm	ISM	Interproscan
CC	GO:0005773	vacuole	IDA	Interproscan
CC	GO:0005774	vacuolar membrane	IDA	Interproscan
CC	GO:0005794	Golgi apparatus	IDA	Interproscan
CC	GO:0005886	plasma membrane	IDA	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006163	purine nucleotide metabolic process	None	Extended
BP	GO:0006164	purine nucleotide biosynthetic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006753	nucleoside phosphate metabolic process	None	Extended
BP	GO:0006754	ATP biosynthetic process	None	Extended
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	ion transport	None	Extended
BP	GO:0006812	cation transport	None	Extended
BP	GO:0006816	calcium ion transport	RCA	Interproscan
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006970	response to osmotic stress	None	Extended
BP	GO:0006996	organelle organization	None	Extended
BP	GO:0007030	Golgi organization	RCA	Interproscan
BP	GO:0007033	vacuole organization	RCA	Interproscan
BP	GO:0007154	cell communication	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008324	cation transmembrane transporter activity	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009117	nucleotide metabolic process	None	Extended
BP	GO:0009141	nucleoside triphosphate metabolic process	None	Extended
BP	GO:0009142	nucleoside triphosphate biosynthetic process	None	Extended
BP	GO:0009144	purine nucleoside triphosphate metabolic process	None	Extended
BP	GO:0009145	purine nucleoside triphosphate biosynthetic process	None	Extended
BP	GO:0009150	purine ribonucleotide metabolic process	None	Extended
BP	GO:0009152	purine ribonucleotide biosynthetic process	None	Extended
BP	GO:0009165	nucleotide biosynthetic process	None	Extended
BP	GO:0009199	ribonucleoside triphosphate metabolic process	None	Extended
BP	GO:0009201	ribonucleoside triphosphate biosynthetic process	None	Extended
BP	GO:0009205	purine ribonucleoside triphosphate metabolic process	None	Extended
BP	GO:0009206	purine ribonucleoside triphosphate biosynthetic process	None	Extended
BP	GO:0009259	ribonucleotide metabolic process	None	Extended
BP	GO:0009260	ribonucleotide biosynthetic process	None	Extended
CC	GO:0009507	chloroplast	IDA	Interproscan
CC	GO:0009526	plastid envelope	None	Extended
CC	GO:0009536	plastid	None	Extended
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009651	response to salt stress	RCA	Interproscan
BP	GO:0009653	anatomical structure morphogenesis	None	Extended
MF	GO:0009678	pyrophosphate hydrolysis-driven proton transmembrane transporter activity	IDA	Interproscan
CC	GO:0009705	plant-type vacuole membrane	IDA	Interproscan
CC	GO:0009941	chloroplast envelope	IDA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0009991	response to extracellular stimulus	None	Extended
MF	GO:0015075	ion transmembrane transporter activity	None	Extended
MF	GO:0015078	proton transmembrane transporter activity	None	Extended
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
BP	GO:0015985	energy coupled proton transport, down electrochemical gradient	None	Extended
BP	GO:0015986	ATP synthesis coupled proton transport	IDA	Interproscan
CC	GO:0016020	membrane	IDA	Interproscan
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016049	cell growth	RCA	Interproscan
BP	GO:0016192	vesicle-mediated transport	None	Extended
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATPase activity	ISS	Interproscan
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0019637	organophosphate metabolic process	None	Extended
BP	GO:0019693	ribose phosphate metabolic process	None	Extended
BP	GO:0022607	cellular component assembly	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022853	active ion transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0022890	inorganic cation transmembrane transporter activity	None	Extended
BP	GO:0030001	metal ion transport	None	Extended
CC	GO:0031090	organelle membrane	None	Extended
BP	GO:0031667	response to nutrient levels	None	Extended
BP	GO:0031668	cellular response to extracellular stimulus	None	Extended
BP	GO:0031669	cellular response to nutrient levels	IGI	Interproscan
CC	GO:0031967	organelle envelope	None	Extended
CC	GO:0031975	envelope	None	Extended
BP	GO:0032119	sequestering of zinc ion	IMP	Interproscan
BP	GO:0032502	developmental process	None	Extended
BP	GO:0034220	ion transmembrane transport	None	Extended
BP	GO:0034622	cellular protein-containing complex assembly	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034654	nucleobase-containing compound biosynthetic process	None	Extended
BP	GO:0040007	growth	None	Extended
BP	GO:0043181	vacuolar sequestering	IMP	Interproscan
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043933	protein-containing complex subunit organization	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
MF	GO:0045735	nutrient reservoir activity	IMP	Interproscan
BP	GO:0046034	ATP metabolic process	None	Extended
BP	GO:0046390	ribose phosphate biosynthetic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0048193	Golgi vesicle transport	RCA	Interproscan
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051235	maintenance of location	None	Extended
BP	GO:0051238	sequestering of metal ion	None	Extended
BP	GO:0051651	maintenance of location in cell	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0055085	transmembrane transport	None	Extended
BP	GO:0055086	nucleobase-containing small molecule metabolic process	None	Extended
BP	GO:0065003	protein-containing complex assembly	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065008	regulation of biological quality	None	Extended
BP	GO:0070070	proton-transporting V-type ATPase complex assembly	None	Extended
BP	GO:0070071	proton-transporting two-sector ATPase complex assembly	None	Extended
BP	GO:0070072	vacuolar proton-transporting V-type ATPase complex assembly	IMP	Interproscan
BP	GO:0071496	cellular response to external stimulus	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0072521	purine-containing compound metabolic process	None	Extended
BP	GO:0072522	purine-containing compound biosynthetic process	None	Extended
BP	GO:0090407	organophosphate biosynthetic process	None	Extended
CC	GO:0098588	bounding membrane of organelle	None	Extended
BP	GO:0098655	cation transmembrane transport	None	Extended
BP	GO:0098660	inorganic ion transmembrane transport	None	Extended
BP	GO:0098662	inorganic cation transmembrane transport	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
BP	GO:1901137	carbohydrate derivative biosynthetic process	None	Extended
BP	GO:1901293	nucleoside phosphate biosynthetic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1902600	proton transmembrane transport	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR002490	V-ATPase_116kDa_su	40	813

External Links

No external refs found!

AT4G39080 (VHA-A3)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation