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  5. Pir_g00630

Pir_g00630


Description : regulatory protein *(RCF3) of HYL1-phosphorylation & original description: none


Gene families : OG0000185 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000185_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g00630

Target Alias Description ECC score Gene Family Method Actions
AT4G18375 No alias RNA-binding KH domain-containing protein 0.03 OrthoFinder output from all 47 species
Adi_g023126 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g04660 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene29933.t2 Aspi01Gene29933 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g10791 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g03943 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g08006 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g14505 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g05936 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g18424 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g03423 No alias regulatory protein *(RCF3) of HYL1-phosphorylation &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001510 RNA methylation IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0009452 7-methylguanosine RNA capping IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0036260 RNA capping IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
InterPro domains Description Start Stop
IPR004088 KH_dom_type_1 165 233
IPR004088 KH_dom_type_1 579 641
IPR004088 KH_dom_type_1 54 110
IPR004088 KH_dom_type_1 326 375
IPR004088 KH_dom_type_1 410 476
No external refs found!