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  5. Pir_g00593

Pir_g00593


Description : ubiquitin-proteasome shuttle factor *(DSK2) & original description: none


Gene families : OG0001912 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001912_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g00593

Target Alias Description ECC score Gene Family Method Actions
AT2G17200 DSK2 ubiquitin family protein 0.02 OrthoFinder output from all 47 species
Adi_g117313 DSK2 ubiquitin-proteasome shuttle factor *(DSK2) & original... 0.03 OrthoFinder output from all 47 species
Aev_g13863 DSK2 ubiquitin-proteasome shuttle factor *(DSK2) & original... 0.04 OrthoFinder output from all 47 species
Aob_g05984 DSK2 ubiquitin-proteasome shuttle factor *(DSK2) & original... 0.02 OrthoFinder output from all 47 species
Aob_g35891 No alias ubiquitin-proteasome shuttle factor *(DSK2) & original... 0.02 OrthoFinder output from all 47 species
Aop_g07304 No alias ubiquitin-proteasome shuttle factor *(DSK2) & original... 0.05 OrthoFinder output from all 47 species
Ceric.21G029800.1 DSK2, Ceric.21G029800 ubiquitin-proteasome shuttle factor *(DSK2) & original... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000983.16 No alias Ubiquitin domain-containing protein DSK2b OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
LOC_Os10g39620.1 LOC_Os10g39620 autophagic adaptor protein (DSK2) 0.03 OrthoFinder output from all 47 species
Ore_g16088 DSK2 ubiquitin-proteasome shuttle factor *(DSK2) & original... 0.03 OrthoFinder output from all 47 species
Ore_g25539 DSK2 ubiquitin-proteasome shuttle factor *(DSK2) & original... 0.04 OrthoFinder output from all 47 species
Pnu_g13508 DSK2 ubiquitin-proteasome shuttle factor *(DSK2) & original... 0.03 OrthoFinder output from all 47 species
Sam_g52286 No alias ubiquitin-proteasome shuttle factor *(DSK2) & original... 0.02 OrthoFinder output from all 47 species
Solyc03g032160.3.1 DSK2, Solyc03g032160 autophagic adaptor protein (DSK2) 0.03 OrthoFinder output from all 47 species
Spa_g06039 DSK2 ubiquitin-proteasome shuttle factor *(DSK2) & original... 0.03 OrthoFinder output from all 47 species
Spa_g21343 No alias ubiquitin-proteasome shuttle factor *(DSK2) & original... 0.02 OrthoFinder output from all 47 species
Zm00001e002242_P002 DSK2, Zm00001e002242 autophagic adaptor protein (DSK2) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
CC GO:0005741 mitochondrial outer membrane IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007030 Golgi organization IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0031968 organelle outer membrane IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
BP GO:0046903 secretion IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
BP GO:0140352 export from cell IEP HCCA
InterPro domains Description Start Stop
IPR015940 UBA 509 545
IPR000626 Ubiquitin-like_dom 17 85
No external refs found!