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  5. Pir_g00511

Pir_g00511 (AtTLP3, TLP3)


Aliases : AtTLP3, TLP3

Description : TUB-type transcription factor & original description: none


Gene families : OG0000251 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000251_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g00511

Target Alias Description ECC score Gene Family Method Actions
Adi_g107883 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g37612 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g04779 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Ehy_g24072 TLP10, AtTLP10 TUB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g24073 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os01g48370.1 AtTLP7, TLP7,... transcription factor (TUB) 0.02 OrthoFinder output from all 47 species
LOC_Os02g47640.1 TLP2, AtTLP2,... transcription factor (TUB) 0.03 OrthoFinder output from all 47 species
LOC_Os08g01290.5 TLP10, AtTLP10,... transcription factor (TUB) 0.05 OrthoFinder output from all 47 species
Len_g27792 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g09266 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g42650 AtTLP1, TLP1 TUB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g04500 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0168.g024249 AtTLP3, TLP3 TUB-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Sam_g14642 No alias TUB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g14941 No alias TUB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Smo83983 AtTLP3, TLP3 RNA biosynthesis.transcriptional activation.TUB... 0.03 OrthoFinder output from all 47 species
Solyc04g071750.4.1 TLP2, AtTLP2,... transcription factor (TUB) 0.02 OrthoFinder output from all 47 species
Tin_g01734 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e019166_P001 TLP10, AtTLP10,... transcription factor (TUB) 0.02 OrthoFinder output from all 47 species
Zm00001e024653_P002 AtTLP1, TLP1,... transcription factor (TUB) 0.02 OrthoFinder output from all 47 species
Zm00001e028052_P001 AtTLP7, TLP7,... transcription factor (TUB) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006612 protein targeting to membrane IEP HCCA
BP GO:0006613 cotranslational protein targeting to membrane IEP HCCA
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP HCCA
MF GO:0008312 7S RNA binding IEP HCCA
MF GO:0016151 nickel cation binding IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0045047 protein targeting to ER IEP HCCA
CC GO:0048500 signal recognition particle IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
BP GO:0070972 protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR001810 F-box_dom 65 111
IPR000007 Tubby_C 126 418
No external refs found!