Len_g59850 (ATCSLD3, KJK, CSLD3)

Aliases : ATCSLD3, KJK, CSLD3

Description : mannan synthase *(CSLD) & original description: none

Gene families : OG0000089 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000089_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Len_g59850
Cluster	HCCA: Cluster_104

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00019p00246190	CSLD1, ATCSLD1,...	Cell wall.hemicellulose.heteromannan.synthesis.mannan...	0.03	OrthoFinder output from all 47 species
AMTR_s00022p00129900	ATCSLD4, CSLD4,...	Cell wall.hemicellulose.heteromannan.synthesis.mannan...	0.03	OrthoFinder output from all 47 species
AMTR_s00048p00116140	ATCSLD3, KJK,...	Cell wall.hemicellulose.heteromannan.synthesis.mannan...	0.03	OrthoFinder output from all 47 species
AMTR_s00061p00200560	ATCSLE1, CSLE1,...	Cellulose synthase-like protein E6 OS=Oryza sativa...	0.03	OrthoFinder output from all 47 species
AMTR_s00137p00043990	MUR10, ATCESA7,...	Cell wall.cellulose.synthesis.cellulose synthase complex...	0.04	OrthoFinder output from all 47 species
AT2G32530	ATCSLB03, CSLB03, ATCSLB3	cellulose synthase-like B3	0.03	OrthoFinder output from all 47 species
AT4G15290	ATCSLB05, CSLB05, ATCSLB5	Cellulose synthase family protein	0.03	OrthoFinder output from all 47 species
AT4G18780	CESA8, LEW2,...	cellulose synthase family protein	0.03	OrthoFinder output from all 47 species
AT5G17420	MUR10, ATCESA7,...	Cellulose synthase family protein	0.05	OrthoFinder output from all 47 species
AT5G44030	CESA4, NWS2, IRX5	cellulose synthase A4	0.04	OrthoFinder output from all 47 species
Adi_g059427	ATCSLD3, KJK, CSLD3	mannan synthase *(CSLD) & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g089068	IXR1, CEV1,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g23590	IXR1, CEV1,...	catalytic component *(CesA) of cellulose synthase...	0.03	OrthoFinder output from all 47 species
Aob_g28659	IXR1, CEV1,...	catalytic component *(CesA) of cellulose synthase...	0.02	OrthoFinder output from all 47 species
Aop_g03236	IXR1, CEV1,...	catalytic component *(CesA) of cellulose synthase...	0.03	OrthoFinder output from all 47 species
Aop_g21811	ATH-A, CESA2, ATCESA2	catalytic component *(CesA) of cellulose synthase...	0.02	OrthoFinder output from all 47 species
Aop_g68533	ATCSLD2, CSLD2	mannan synthase *(CSLD) & original description: none	0.05	OrthoFinder output from all 47 species
Aspi01Gene30569.t1	IXR1, CEV1,...	catalytic component *(CesA) of cellulose synthase...	0.05	OrthoFinder output from all 47 species
Azfi_s0004.g008840	ATCSLD3, KJK, CSLD3	mannan synthase *(CSLD) & original description: CDS=44-3832	0.02	OrthoFinder output from all 47 species
Azfi_s0182.g056403	MUR10, ATCESA7,...	not classified & original description: CDS=1-1620	0.05	OrthoFinder output from all 47 species
Cba_g14283	IXR1, CEV1,...	catalytic component *(CesA) of cellulose synthase...	0.03	OrthoFinder output from all 47 species
Ceric.03G069300.1	AtCESA1, RSW1,...	catalytic component *(CesA) of cellulose synthase...	0.05	OrthoFinder output from all 47 species
Ceric.09G024100.1	IXR1, CEV1,...	catalytic component *(CesA) of cellulose synthase...	0.03	OrthoFinder output from all 47 species
Ceric.13G049300.1	IXR1, CEV1,...	catalytic component *(CesA) of cellulose synthase...	0.04	OrthoFinder output from all 47 species
Ceric.30G072100.1	ATCSLD3, KJK,...	mannan synthase *(CSLD) & original description:...	0.03	OrthoFinder output from all 47 species
Dac_g30499	IXR1, CEV1,...	catalytic component *(CesA) of cellulose synthase...	0.03	OrthoFinder output from all 47 species
Dcu_g37271	IXR1, CEV1,...	catalytic component *(CesA) of cellulose synthase...	0.05	OrthoFinder output from all 47 species
Dde_g38793	IXR1, CEV1,...	catalytic component *(CesA) of cellulose synthase...	0.03	OrthoFinder output from all 47 species
Dde_g48668	ATCSLD3, KJK, CSLD3	mannan synthase *(CSLD) & original description: none	0.04	OrthoFinder output from all 47 species
Ehy_g04030	IXR1, CEV1,...	catalytic component *(CesA) of cellulose synthase...	0.04	OrthoFinder output from all 47 species
Ehy_g06173	IXR1, CEV1,...	catalytic component *(CesA) of cellulose synthase...	0.02	OrthoFinder output from all 47 species
Ehy_g06186	CESA09, CESA9	catalytic component *(CesA) of cellulose synthase...	0.03	OrthoFinder output from all 47 species
Ehy_g27936	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
GSVIVT01006761001	ATCSLE1, CSLE1	Cellulose synthase-like protein E6 OS=Oryza sativa...	0.03	OrthoFinder output from all 47 species
GSVIVT01006764001	ATCSLE1, CSLE1	Cellulose synthase-like protein E6 OS=Oryza sativa...	0.03	OrthoFinder output from all 47 species
GSVIVT01007038001	ATCSLE1, CSLE1	Cellulose synthase-like protein E1 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
GSVIVT01021248001	CESA8, LEW2,...	Cell wall.cellulose.synthesis.cellulose synthase complex...	0.05	OrthoFinder output from all 47 species
GSVIVT01023643001	MUR10, ATCESA7,...	Cell wall.cellulose.synthesis.cellulose synthase complex...	0.05	OrthoFinder output from all 47 species
GSVIVT01023837001	ATH-A, CESA2, ATCESA2	Cell wall.cellulose.synthesis.cellulose synthase complex...	0.02	OrthoFinder output from all 47 species
GSVIVT01028402001	CESA4, NWS2, IRX5	Cell wall.cellulose.synthesis.cellulose synthase complex...	0.05	OrthoFinder output from all 47 species
GSVIVT01030458001	CSLB04, ATCSLB4, ATCSLB04	Cellulose synthase-like protein H1 OS=Oryza sativa...	0.02	OrthoFinder output from all 47 species
GSVIVT01030464001	CSLB04, ATCSLB4, ATCSLB04	Cellulose synthase-like protein H1 OS=Oryza sativa...	0.03	OrthoFinder output from all 47 species
GSVIVT01030467001	CSLB04, ATCSLB4, ATCSLB04	Cellulose synthase-like protein H1 OS=Oryza sativa...	0.03	OrthoFinder output from all 47 species
Gb_06082	MUR10, ATCESA7,...	Cellulose synthase A catalytic subunit 9 [UDP-forming]...	0.03	OrthoFinder output from all 47 species
Gb_07428	AtCESA1, RSW1, CESA1	catalytic component CesA of cellulose synthase complex	0.03	OrthoFinder output from all 47 species
Gb_07444	AtCESA1, RSW1, CESA1	catalytic component CesA of cellulose synthase complex	0.03	OrthoFinder output from all 47 species
Gb_31853	MUR10, ATCESA7,...	catalytic component CesA of cellulose synthase complex	0.04	OrthoFinder output from all 47 species
LOC_Os01g54620.1	CESA8, LEW2,...	catalytic component CesA of cellulose synthase complex	0.05	OrthoFinder output from all 47 species
LOC_Os07g10770.1	IXR1, CEV1,...	catalytic component CesA of cellulose synthase complex	0.02	OrthoFinder output from all 47 species
LOC_Os07g24190.1	CESA6, PRC1,...	catalytic component CesA of cellulose synthase complex	0.03	OrthoFinder output from all 47 species
LOC_Os07g36630.1	ATCSLD5, CSLD5,...	D-glucan synthase (CSLF)	0.04	OrthoFinder output from all 47 species
LOC_Os07g36690.1	ATCSLD2, CSLD2,...	D-glucan synthase (CSLF)	0.04	OrthoFinder output from all 47 species
LOC_Os07g36700.1	ATCSLD2, CSLD2,...	D-glucan synthase (CSLF)	0.01	OrthoFinder output from all 47 species
LOC_Os07g36740.1	ATCSLD2, CSLD2,...	D-glucan synthase (CSLF)	0.02	OrthoFinder output from all 47 species
LOC_Os08g06380.1	ATCSLD2, CSLD2,...	mannan synthase (CSLD). D-glucan synthase (CSLF)	0.02	OrthoFinder output from all 47 species
LOC_Os09g25490.1	MUR10, ATCESA7,...	catalytic component CesA of cellulose synthase complex	0.05	OrthoFinder output from all 47 species
LOC_Os10g20260.1	ATCSLD3, KJK,...	Probable mixed-linked glucan synthase 7 OS=Oryza sativa...	0.02	OrthoFinder output from all 47 species
LOC_Os10g32980.1	CESA4, NWS2,...	catalytic component CesA of cellulose synthase complex	0.05	OrthoFinder output from all 47 species
LOC_Os10g42750.1	ATCSLD3, KJK,...	mannan synthase (CSLD)	0.04	OrthoFinder output from all 47 species
MA_10429177g0010	CESA8, LEW2,...	catalytic component CesA of cellulose synthase complex	0.02	OrthoFinder output from all 47 species
MA_10435322g0010	AtCESA1, RSW1, CESA1	Probable cellulose synthase A catalytic subunit 2...	0.02	OrthoFinder output from all 47 species
MA_183130g0010	CESA4, NWS2, IRX5	catalytic component CesA of cellulose synthase complex	0.02	OrthoFinder output from all 47 species
MA_195271g0010	ATCSLE1, CSLE1	Cellulose synthase-like protein E6 OS=Oryza sativa...	0.02	OrthoFinder output from all 47 species
MA_415945g0010	ATCSLB05, CSLB05, ATCSLB5	Cellulose synthase-like protein B5 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
MA_8061832g0010	CESA4, NWS2, IRX5	Cellulose synthase A catalytic subunit 4 [UDP-forming]...	0.04	OrthoFinder output from all 47 species
Mp2g02440.1	ATCSLD3, KJK, CSLD3	mannan synthase (CSLD)	0.02	OrthoFinder output from all 47 species
Mp2g05640.1	ATCSLD3, KJK, CSLD3	mannan synthase (CSLD)	0.02	OrthoFinder output from all 47 species
Mp2g05660.1	ATCSLD3, KJK, CSLD3	catalytic component CesA of cellulose synthase complex....	0.02	OrthoFinder output from all 47 species
Mp2g05670.1	ATCSLD3, KJK, CSLD3	catalytic component CesA of cellulose synthase complex....	0.03	OrthoFinder output from all 47 species
Mp5g24530.1	ATCSLD2, CSLD2	mannan synthase (CSLD)	0.02	OrthoFinder output from all 47 species
Mp7g07800.1	AtCESA1, RSW1, CESA1	catalytic component CesA of cellulose synthase complex	0.01	OrthoFinder output from all 47 species
Msp_g31765	AtCESA1, RSW1, CESA1	catalytic component *(CesA) of cellulose synthase...	0.04	OrthoFinder output from all 47 species
Msp_g36063	IXR1, CEV1,...	catalytic component *(CesA) of cellulose synthase...	0.03	OrthoFinder output from all 47 species
Nbi_g27743	ATCSLD2, CSLD2	mannan synthase *(CSLD) & original description: none	0.11	OrthoFinder output from all 47 species
Ore_g09621	MUR10, ATCESA7,...	catalytic component *(CesA) of cellulose synthase...	0.03	OrthoFinder output from all 47 species
Ore_g36488	ATH-A, CESA2, ATCESA2	catalytic component *(CesA) of cellulose synthase...	0.02	OrthoFinder output from all 47 species
Ore_g37613	ATCSLD3, KJK, CSLD3	mannan synthase *(CSLD) & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g44822	ATCSLD3, KJK, CSLD3	mannan synthase *(CSLD) & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g19942	ATH-A, CESA2, ATCESA2	catalytic component *(CesA) of cellulose synthase...	0.03	OrthoFinder output from all 47 species
Ppi_g05332	ATCSLD3, KJK, CSLD3	mannan synthase *(CSLD) & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g16136	ATCSLD5, CSLD5, SOS6	mannan synthase *(CSLD) & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0104.g020080	ATCSLD5, CSLD5, SOS6	not classified & original description: CDS=1-2631	0.02	OrthoFinder output from all 47 species
Sam_g24445	No alias	catalytic component *(CesA) of cellulose synthase...	0.02	OrthoFinder output from all 47 species
Sam_g27647	No alias	catalytic component *(CesA) of cellulose synthase...	0.02	OrthoFinder output from all 47 species
Solyc02g072240.3.1	CESA8, LEW2,...	catalytic component CesA of cellulose synthase complex	0.03	OrthoFinder output from all 47 species
Solyc03g005450.3.1	ATCSLG2, CSLG2,...	Cellulose synthase-like protein G1 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Solyc04g072790.2.1	ATH-A, CESA2,...	catalytic component CesA of cellulose synthase complex	0.05	OrthoFinder output from all 47 species
Solyc07g005840.2.1	MUR10, ATCESA7,...	catalytic component CesA of cellulose synthase complex	0.03	OrthoFinder output from all 47 species
Solyc07g065660.4.1	ATCSLE1, CSLE1,...	Cellulose synthase-like protein E1 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Solyc08g076320.3.1	ATCSLD3, KJK,...	mannan synthase (CSLD)	0.02	OrthoFinder output from all 47 species
Solyc09g072820.4.1	CESA4, NWS2,...	catalytic component CesA of cellulose synthase complex	0.03	OrthoFinder output from all 47 species
Solyc09g089573.1.1	ATCSLG3, CSLG3,...	Cellulose synthase-like protein G3 OS=Arabidopsis...	0.01	OrthoFinder output from all 47 species
Spa_g26805	IXR1, CEV1,...	catalytic component *(CesA) of cellulose synthase...	0.03	OrthoFinder output from all 47 species
Zm00001e004630_P001	CESA4, NWS2,...	catalytic component CesA of cellulose synthase complex	0.04	OrthoFinder output from all 47 species
Zm00001e004740_P001	ATCSLD3, KJK,...	Probable mixed-linked glucan synthase 7 OS=Oryza sativa...	0.03	OrthoFinder output from all 47 species
Zm00001e008117_P005	CSLB04, ATCSLB4,...	D-glucan synthase (CSLH)	0.02	OrthoFinder output from all 47 species
Zm00001e009843_P002	MUR10, ATCESA7,...	catalytic component CesA of cellulose synthase complex	0.04	OrthoFinder output from all 47 species
Zm00001e010533_P001	ATCSLD3, KJK,...	D-glucan synthase (CSLF)	0.02	OrthoFinder output from all 47 species
Zm00001e019828_P001	CESA8, LEW2,...	catalytic component CesA of cellulose synthase complex	0.03	OrthoFinder output from all 47 species
Zm00001e021697_P002	ATCSLD2, CSLD2,...	mannan synthase (CSLD). D-glucan synthase (CSLF)	0.04	OrthoFinder output from all 47 species
Zm00001e029046_P001	CESA8, LEW2,...	Cellulose synthase A catalytic subunit 4 [UDP-forming]...	0.02	OrthoFinder output from all 47 species
Zm00001e034187_P001	MUR10, ATCESA7,...	catalytic component CesA of cellulose synthase complex	0.04	OrthoFinder output from all 47 species
Zm00001e035207_P001	ATCSLD3, KJK,...	D-glucan synthase (CSLF)	0.03	OrthoFinder output from all 47 species
Zm00001e037015_P002	CSLD1, ATCSLD1,...	mannan synthase (CSLD)	0.02	OrthoFinder output from all 47 species
Zm00001e040201_P001	ATCSLD2, CSLD2,...	mannan synthase (CSLD). D-glucan synthase (CSLF)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000271	polysaccharide biosynthetic process	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0006073	cellular glucan metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008194	UDP-glycosyltransferase activity	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009250	glucan biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
BP	GO:0016051	carbohydrate biosynthetic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016757	glycosyltransferase activity	None	Extended
MF	GO:0016758	hexosyltransferase activity	None	Extended
MF	GO:0016759	cellulose synthase activity	None	Extended
MF	GO:0016760	cellulose synthase (UDP-forming) activity	IEA	Interproscan
BP	GO:0030243	cellulose metabolic process	None	Extended
BP	GO:0030244	cellulose biosynthetic process	IEA	Interproscan
BP	GO:0033692	cellular polysaccharide biosynthetic process	None	Extended
BP	GO:0034637	cellular carbohydrate biosynthetic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
MF	GO:0035251	UDP-glucosyltransferase activity	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044042	glucan metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044262	cellular carbohydrate metabolic process	None	Extended
BP	GO:0044264	cellular polysaccharide metabolic process	None	Extended
MF	GO:0046527	glucosyltransferase activity	None	Extended
BP	GO:0051273	beta-glucan metabolic process	None	Extended
BP	GO:0051274	beta-glucan biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0004650	polygalacturonase activity	IEP	HCCA
MF	GO:0005507	copper ion binding	IEP	HCCA
MF	GO:0046914	transition metal ion binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR005150	Cellulose_synth	739	1115
IPR005150	Cellulose_synth	375	735

External Links

No external refs found!

Len_g59850 (ATCSLD3, KJK, CSLD3)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation