Len_g59713


Description : GARP subgroup PHL transcription factor & original description: none


Gene families : OG0000036 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g59713

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00224230 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.01 OrthoFinder output from all 47 species
AMTR_s00142p00049490 evm_27.TU.AmTr_v1... Nutrient uptake.phosphorus assimilation.phosphate... 0.01 OrthoFinder output from all 47 species
AT2G01060 No alias myb-like HTH transcriptional regulator family protein 0.02 OrthoFinder output from all 47 species
AT2G42660 No alias Homeodomain-like superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g008111 No alias KANAdi-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g054713 No alias GARP subgroup PHL transcription factor & original... 0.06 OrthoFinder output from all 47 species
Adi_g081643 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Adi_g095329 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Adi_g108057 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aev_g07292 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aev_g39180 No alias transcription factor *(CLAUSA) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g10988 PHR1, AtPHR1 GARP subgroup PHL transcription factor & original... 0.05 OrthoFinder output from all 47 species
Ala_g22830 No alias transcription factor *(CLAUSA) & original description: none 0.01 OrthoFinder output from all 47 species
Aob_g01648 No alias GARP subgroup PHL transcription factor & original... 0.01 OrthoFinder output from all 47 species
Aob_g01763 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aob_g04221 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Aop_g05634 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Aop_g06318 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aop_g37611 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene03462.t1 Aspi01Gene03462 transcription factor *(CLAUSA) & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene14328.t1 KAN, KAN1,... KANADI-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene24371.t1 Aspi01Gene24371 GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene24979.t1 Aspi01Gene24979 GARP subgroup PHL transcription factor & original... 0.01 OrthoFinder output from all 47 species
Aspi01Gene32964.t1 Aspi01Gene32964 GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene35964.t1 Aspi01Gene35964 GARP subgroup PHL transcription factor & original... 0.01 OrthoFinder output from all 47 species
Aspi01Gene36283.t1 Aspi01Gene36283 GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene40313.t1 KAN, KAN1,... KANADI-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene56415.t1 Aspi01Gene56415 transcription factor *(CLAUSA) & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene65261.t1 Aspi01Gene65261 GARP subgroup PHL transcription factor & original... 0.01 OrthoFinder output from all 47 species
Azfi_s0006.g009521 No alias not classified & original description: CDS=1-1092 0.02 OrthoFinder output from all 47 species
Cba_g26945 PHR1, AtPHR1 GARP subgroup PHL transcription factor & original... 0.07 OrthoFinder output from all 47 species
Ceric.10G090700.1 Ceric.10G090700 GARP subgroup PHL transcription factor & original... 0.05 OrthoFinder output from all 47 species
Ceric.32G050900.1 Ceric.32G050900 transcription factor *(CLAUSA) & original description:... 0.05 OrthoFinder output from all 47 species
Dac_g03192 No alias GARP subgroup PHL transcription factor & original... 0.01 OrthoFinder output from all 47 species
Dac_g08384 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dac_g34786 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Dac_g36923 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Dcu_g02950 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Dcu_g04782 No alias transcription factor *(CLAUSA) & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g26187 No alias GARP subgroup PHL transcription factor & original... 0.01 OrthoFinder output from all 47 species
Dcu_g39820 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Dde_g21452 No alias GARP subgroup PHL transcription factor & original... 0.01 OrthoFinder output from all 47 species
Dde_g48326 No alias GARP subgroup PHL transcription factor & original... 0.01 OrthoFinder output from all 47 species
Ehy_g00938 No alias transcription factor *(CLAUSA) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g13705 No alias GARP subgroup PHL transcription factor & original... 0.01 OrthoFinder output from all 47 species
Ehy_g15705 KAN2 KANADI-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Gb_25992 No alias G2-like GARP transcription factor 0.01 OrthoFinder output from all 47 species
LOC_Os04g47890.1 LOC_Os04g47890 G2-like GARP transcription factor 0.08 OrthoFinder output from all 47 species
LOC_Os08g06370.1 KAN2, LOC_Os08g06370 G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
LOC_Os11g01480.1 LOC_Os11g01480 Putative Myb family transcription factor At1g14600... 0.02 OrthoFinder output from all 47 species
LOC_Os12g01490.1 LOC_Os12g01490 Putative Myb family transcription factor At1g14600... 0.02 OrthoFinder output from all 47 species
Len_g06559 No alias GARP subgroup PHL transcription factor & original... 0.12 OrthoFinder output from all 47 species
Len_g07677 No alias transcription factor *(CLAUSA) & original description: none 0.01 OrthoFinder output from all 47 species
Len_g09088 KAN2 KANADI-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Len_g21596 PHR1, AtPHR1 GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Len_g21789 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Len_g22909 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Len_g49712 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g50093 No alias GARP subgroup PHL transcription factor & original... 0.05 OrthoFinder output from all 47 species
Lfl_g05331 No alias transcription factor *(CLAUSA) & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g24951 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g36756 No alias transcription factor *(CLAUSA) & original description: none 0.01 OrthoFinder output from all 47 species
MA_10430912g0010 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
MA_52379g0010 No alias G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
MA_8183372g0010 No alias G2-like GARP transcription factor 0.01 OrthoFinder output from all 47 species
Msp_g24340 PHL1 GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Msp_g25706 No alias transcription factor *(CLAUSA) & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g25933 No alias transcription factor *(CLAUSA) & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g05367 KAN, KAN1 KANADI-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g12418 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Nbi_g24259 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ore_g19106 KAN, KAN1 KANADI-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g37615 KAN, KAN1 KANADI-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g12454 No alias GARP subgroup PHL transcription factor & original... 0.01 OrthoFinder output from all 47 species
Ppi_g05575 No alias GARP subgroup PHL transcription factor & original... 0.01 OrthoFinder output from all 47 species
Ppi_g31777 No alias transcription factor *(CLAUSA) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g60520 KAN, KAN1 KANADI-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0065.g016001 No alias not classified & original description: CDS=379-1050 0.01 OrthoFinder output from all 47 species
Sam_g19047 No alias GARP subgroup PHL transcription factor & original... 0.01 OrthoFinder output from all 47 species
Sam_g22183 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo149357 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
Solyc05g055940.3.1 PHL1, Solyc05g055940 PHR1 transcription factor involved in proline synthesis... 0.02 OrthoFinder output from all 47 species
Spa_g10529 KAN, KAN1 KANADI-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g47326 No alias GARP subgroup PHL transcription factor & original... 0.01 OrthoFinder output from all 47 species
Tin_g08752 No alias transcription factor *(CLAUSA) & original description: none 0.01 OrthoFinder output from all 47 species
Tin_g12933 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Zm00001e023282_P002 KAN2, Zm00001e023282 G2-like GARP transcription factor 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001005 SANT/Myb 297 347
IPR025756 Myb_CC_LHEQLE 394 439
No external refs found!