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  5. Len_g59568

Len_g59568 (RAD51, ATRAD51)


Aliases : RAD51, ATRAD51

Description : component *(RAD51) of BRCC regulatory deubiquination complex & original description: none


Gene families : OG0001716 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001716_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g59568

Target Alias Description ECC score Gene Family Method Actions
Ala_g23150 RAD51, ATRAD51 component *(RAD51) of BRCC regulatory deubiquination... 0.06 OrthoFinder output from all 47 species
Als_g52823 RAD51, ATRAD51 component *(RAD51) of BRCC regulatory deubiquination... 0.05 OrthoFinder output from all 47 species
Azfi_s0094.g043383 XRCC3, ATXRCC3 component *(XRCC3) of RAD51c-XRCC3 accessory DSB repair... 0.02 OrthoFinder output from all 47 species
Ceric.01G082000.1 RAD51, ATRAD51,... component *(RAD51) of BRCC regulatory deubiquination... 0.09 OrthoFinder output from all 47 species
Ceric.17G014900.1 XRCC3, ATXRCC3,... component *(XRCC3) of RAD51c-XRCC3 accessory DSB repair... 0.03 OrthoFinder output from all 47 species
Cre14.g622850 RAD51, ATRAD51 DNA damage response.BRCC DNA-damage response... 0.02 OrthoFinder output from all 47 species
Dac_g00622 RAD51, ATRAD51 component *(RAD51) of BRCC regulatory deubiquination... 0.06 OrthoFinder output from all 47 species
Dcu_g00814 RAD51, ATRAD51 component *(RAD51) of BRCC regulatory deubiquination... 0.04 OrthoFinder output from all 47 species
GSVIVT01015002001 RAD51, ATRAD51 DNA damage response.BRCC DNA-damage response... 0.06 OrthoFinder output from all 47 species
Gb_14443 RAD51, ATRAD51 DNA repair protein RAD51 homolog OS=Solanum lycopersicum... 0.03 OrthoFinder output from all 47 species
LOC_Os02g35450.1 XRCC3, ATXRCC3,... component XRCC3 of RAD51c-XRCC3 accessory DSB repair heterodimer 0.02 OrthoFinder output from all 47 species
Lfl_g17235 RAD51, ATRAD51 component *(RAD51) of BRCC regulatory deubiquination... 0.03 OrthoFinder output from all 47 species
MA_93267g0010 RAD51, ATRAD51 DNA repair protein RAD51 homolog 1 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
Mp3g22920.1 RAD51, ATRAD51 component RAD51 of BRCC DNA-damage response complex 0.05 OrthoFinder output from all 47 species
Mp7g15410.1 XRCC3, ATXRCC3 component XRCC3 of RAD51c-XRCC3 accessory DSB repair heterodimer 0.08 OrthoFinder output from all 47 species
Msp_g01981 RAD51, ATRAD51 component *(RAD51) of BRCC regulatory deubiquination... 0.09 OrthoFinder output from all 47 species
Nbi_g04179 RAD51, ATRAD51 component *(RAD51) of BRCC regulatory deubiquination... 0.08 OrthoFinder output from all 47 species
Nbi_g08435 XRCC3, ATXRCC3 component *(XRCC3) of RAD51c-XRCC3 accessory DSB repair... 0.03 OrthoFinder output from all 47 species
Ore_g32787 RAD51, ATRAD51 component *(RAD51) of BRCC regulatory deubiquination... 0.03 OrthoFinder output from all 47 species
Ppi_g02833 RAD51, ATRAD51 component *(RAD51) of BRCC regulatory deubiquination... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0118.g021196 XRCC3, ATXRCC3 component *(XRCC3) of RAD51c-XRCC3 accessory DSB repair... 0.03 OrthoFinder output from all 47 species
Solyc07g017540.4.1 RAD51, ATRAD51,... component RAD51 of BRCC DNA-damage response complex 0.02 OrthoFinder output from all 47 species
Spa_g38367 RAD51, ATRAD51 component *(RAD51) of BRCC regulatory deubiquination... 0.07 OrthoFinder output from all 47 species
Tin_g05894 RAD51, ATRAD51 component *(RAD51) of BRCC regulatory deubiquination... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
InterPro domains Description Start Stop
IPR013632 DNA_recomb/repair_Rad51_C 86 338
No external refs found!