Len_g59567


Description : not classified & original description: none


Gene families : OG0001104 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001104_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g59567

Target Alias Description ECC score Gene Family Method Actions
AT2G01390 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g015741 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g023647 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g07294 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g06419 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18254 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g17323 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g17130 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g34945 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g02988 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g09922 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01019040001 No alias Pentatricopeptide repeat-containing protein At5g66631... 0.02 OrthoFinder output from all 47 species
Msp_g15826 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g19603 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g003004 No alias not classified & original description: CDS=1-2094 0.03 OrthoFinder output from all 47 species
Sam_g13668 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 200 229
IPR033443 PPR_long 250 380
IPR002885 Pentatricopeptide_repeat 532 589
IPR002885 Pentatricopeptide_repeat 652 689
No external refs found!