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  5. Len_g59470

Len_g59470


Description : not classified & original description: none


Gene families : OG0000195 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000195_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g59470

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00240480 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.hydroxyproline-rich... 0.05 OrthoFinder output from all 47 species
AMTR_s00006p00264910 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00013p00038620 LTPG1,... Cell wall.cutin and suberin.export.LTPG cuticular lipid... 0.02 OrthoFinder output from all 47 species
AMTR_s00142p00106070 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.hydroxyproline-rich... 0.02 OrthoFinder output from all 47 species
AMTR_s01773p00009760 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT1G55260 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 OrthoFinder output from all 47 species
AT3G22600 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.02 OrthoFinder output from all 47 species
AT3G43720 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.06 OrthoFinder output from all 47 species
AT3G58550 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.04 OrthoFinder output from all 47 species
Aev_g42840 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g23852 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g06034 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g15133 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene12060.t1 Aspi01Gene12060 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene44733.t1 Aspi01Gene44733 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0009.g012021 No alias not classified & original description: CDS=95-559 0.04 OrthoFinder output from all 47 species
Azfi_s0011.g012661 LTPG1 not classified & original description: CDS=60-632 0.05 OrthoFinder output from all 47 species
Azfi_s0803.g087563 No alias arabinogalactan protein *(Xylogen) & original... 0.03 OrthoFinder output from all 47 species
Cba_g01588 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G082200.1 Ceric.01G082200 not classified & original description: pacid=50591603... 0.04 OrthoFinder output from all 47 species
Ceric.05G095500.1 Ceric.05G095500 not classified & original description: pacid=50577222... 0.03 OrthoFinder output from all 47 species
Ceric.12G092300.1 Ceric.12G092300 not classified & original description: pacid=50600852... 0.03 OrthoFinder output from all 47 species
Ceric.35G030300.1 Ceric.35G030300 not classified & original description: pacid=50581753... 0.03 OrthoFinder output from all 47 species
Dcu_g02508 No alias arabinogalactan protein *(Xylogen) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g06089 LTPG1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g04455 No alias arabinogalactan protein *(Xylogen) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g06369 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g11056 No alias arabinogalactan protein *(Xylogen) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01001178001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.04 OrthoFinder output from all 47 species
GSVIVT01001181001 EDA4 No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01018008001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.02 OrthoFinder output from all 47 species
GSVIVT01018010001 No alias No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01025413001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.04 OrthoFinder output from all 47 species
Gb_02443 No alias xylogen-type arabinogalactan protein 0.02 OrthoFinder output from all 47 species
Gb_02446 No alias xylogen-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species
Gb_02455 No alias xylogen-type arabinogalactan protein 0.02 OrthoFinder output from all 47 species
Gb_02458 No alias xylogen-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species
Gb_24349 No alias xylogen-type arabinogalactan protein 0.04 OrthoFinder output from all 47 species
LOC_Os01g59870.1 LOC_Os01g59870 xylogen-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species
LOC_Os03g58940.1 LOC_Os03g58940 xylogen-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species
LOC_Os06g49770.1 LOC_Os06g49770 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os07g07860.1 LOC_Os07g07860 xylogen-type arabinogalactan protein 0.02 OrthoFinder output from all 47 species
LOC_Os10g11370.1 LOC_Os10g11370 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os11g37280.1 LOC_Os11g37280 Non-specific lipid-transfer protein C6 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
Lfl_g06401 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
MA_10069449g0010 No alias xylogen-type arabinogalactan protein 0.02 OrthoFinder output from all 47 species
MA_133359g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_1925g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_26320g0020 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_383975g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_50191g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_5581g0010 No alias xylogen-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species
Mp8g18180.1 No alias xylogen-type arabinogalactan protein 0.06 OrthoFinder output from all 47 species
Msp_g06695 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g07639 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g04557 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g27615 No alias arabinogalactan protein *(Xylogen) & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g04354 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g28932 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g37948 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g59467 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g10483 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g61681 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0073.g017064 No alias arabinogalactan protein *(Xylogen) & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0169.g024327 No alias not classified & original description: CDS=1-432 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0169.g024331 No alias not classified & original description: CDS=1491-1979 0.03 OrthoFinder output from all 47 species
Sam_g02332 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g33803 No alias arabinogalactan protein *(Xylogen) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g005985.1.1 Solyc01g005985 xylogen-type arabinogalactan protein 0.04 OrthoFinder output from all 47 species
Solyc03g005210.4.1 Solyc03g005210 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc06g054030.2.1 Solyc06g054030 xylogen-type arabinogalactan protein 0.02 OrthoFinder output from all 47 species
Solyc06g073660.3.1 Solyc06g073660 xylogen-type arabinogalactan protein 0.04 OrthoFinder output from all 47 species
Solyc09g065440.4.1 EDA4, Solyc09g065440 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc09g082280.3.1 Solyc09g082280 xylogen-type arabinogalactan protein 0.02 OrthoFinder output from all 47 species
Solyc09g082300.3.1 EDA4, Solyc09g082300 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc11g072030.3.1 Solyc11g072030 xylogen-type arabinogalactan protein 0.04 OrthoFinder output from all 47 species
Spa_g11499 No alias arabinogalactan protein *(Xylogen) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g25113 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g30752 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g13589 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g35700 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e000506_P001 Zm00001e000506 xylogen-type arabinogalactan protein 0.04 OrthoFinder output from all 47 species
Zm00001e001853_P001 Zm00001e001853 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e005959_P003 Zm00001e005959 xylogen-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species
Zm00001e005961_P001 Zm00001e005961 xylogen-type arabinogalactan protein 0.02 OrthoFinder output from all 47 species
Zm00001e006054_P001 Zm00001e006054 xylogen-type arabinogalactan protein 0.02 OrthoFinder output from all 47 species
Zm00001e010812_P001 Zm00001e010812 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e011463_P001 Zm00001e011463 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e013066_P001 Zm00001e013066 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e028880_P001 Zm00001e028880 xylogen-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species
Zm00001e030289_P001 Zm00001e030289 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e032912_P001 Zm00001e032912 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006813 potassium ion transport IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0071805 potassium ion transmembrane transport IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR016140 Bifunc_inhib/LTP/seed_store 85 175
No external refs found!