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  5. Len_g58930

Len_g58930


Description : not classified & original description: none


Gene families : OG0004827 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004827_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g58930
Cluster HCCA: Cluster_104

Target Alias Description ECC score Gene Family Method Actions
Aob_g17861 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene38744.t1 Aspi01Gene38744 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.08G049600.1 Ceric.08G049600 not classified & original description: pacid=50638367... 0.05 OrthoFinder output from all 47 species
Ceric.08G049900.1 Ceric.08G049900 not classified & original description: pacid=50638950... 0.03 OrthoFinder output from all 47 species
Ceric.08G050000.1 Ceric.08G050000 not classified & original description: pacid=50637967... 0.03 OrthoFinder output from all 47 species
Ceric.08G050100.1 Ceric.08G050100 not classified & original description: pacid=50638776... 0.03 OrthoFinder output from all 47 species
Ehy_g06662 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g15545 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g28322 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g15317 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g29900 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo432432 No alias Probable xyloglucan glycosyltransferase 5 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Smo448970 No alias Probable xyloglucan glycosyltransferase 5 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!