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  5. Len_g58792

Len_g58792 (MCA1)


Aliases : MCA1

Description : mechanosensitive cation channel *(MCA) & original description: none


Gene families : OG0002415 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002415_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g58792
Cluster HCCA: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00152p00084120 MCA1,... Solute transport.channels.MCA mechanosensitive cation channel 0.04 OrthoFinder output from all 47 species
Ala_g01696 MCA1 mechanosensitive cation channel *(MCA) & original... 0.03 OrthoFinder output from all 47 species
Als_g14909 MCA1 mechanosensitive cation channel *(MCA) & original... 0.05 OrthoFinder output from all 47 species
Als_g16184 MCA1 mechanosensitive cation channel *(MCA) & original... 0.04 OrthoFinder output from all 47 species
Aob_g29407 MCA1 mechanosensitive cation channel *(MCA) & original... 0.02 OrthoFinder output from all 47 species
Aop_g05446 MCA1 mechanosensitive cation channel *(MCA) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene59351.t2 MCA2, Aspi01Gene59351 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g13527 MCA1 mechanosensitive cation channel *(MCA) & original... 0.04 OrthoFinder output from all 47 species
Cba_g31700 MCA1 mechanosensitive cation channel *(MCA) & original... 0.02 OrthoFinder output from all 47 species
Ceric.03G065900.1 MCA1, Ceric.03G065900 mechanosensitive cation channel *(MCA) & original... 0.04 OrthoFinder output from all 47 species
Dcu_g06243 MCA1 mechanosensitive cation channel *(MCA) & original... 0.03 OrthoFinder output from all 47 species
Dcu_g32743 MCA1 mechanosensitive cation channel *(MCA) & original... 0.03 OrthoFinder output from all 47 species
LOC_Os03g06120.3 MCA1, LOC_Os03g06120 mechanosensitive cation channel (MCA) 0.02 OrthoFinder output from all 47 species
MA_10433546g0010 MCA2 Protein MID1-COMPLEMENTING ACTIVITY 2 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_1425g0010 MCA1 Cell number regulator 13 OS=Zea mays... 0.02 OrthoFinder output from all 47 species
Mp5g19510.1 MCA1 mechanosensitive cation channel (MCA) 0.05 OrthoFinder output from all 47 species
Msp_g20081 MCA1 mechanosensitive cation channel *(MCA) & original... 0.04 OrthoFinder output from all 47 species
Nbi_g12337 MCA1 mechanosensitive cation channel *(MCA) & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g001243 MCA1 not classified & original description: CDS=164-2053 0.03 OrthoFinder output from all 47 species
Sam_g09606 No alias mechanosensitive cation channel *(MCA) & original... 0.02 OrthoFinder output from all 47 species
Sam_g29618 No alias mechanosensitive cation channel *(MCA) & original... 0.02 OrthoFinder output from all 47 species
Solyc02g083540.3.1 MCA1, Solyc02g083540 mechanosensitive cation channel (MCA) 0.03 OrthoFinder output from all 47 species
Tin_g01953 MCA1 mechanosensitive cation channel *(MCA) & original... 0.04 OrthoFinder output from all 47 species
Zm00001e000437_P001 MCA1, Zm00001e000437 mechanosensitive cation channel (MCA) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
CC GO:0048046 apoplast IEP HCCA
InterPro domains Description Start Stop
IPR045766 MCAfunc 27 167
No external refs found!