AT4G37170


Description : Pentatricopeptide repeat (PPR) superfamily protein


Gene families : OG_01_0017699 (Archaeplastida) Phylogenetic Tree(s): OG_01_0017699_tree ,
OG_02_0017489 (LandPlants) Phylogenetic Tree(s): OG_02_0017489_tree ,
OG_03_0017045 (SeedPlants) Phylogenetic Tree(s): OG_03_0017045_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G37170
Cluster HCCA: Cluster_114

Target Alias Description ECC score Gene Family Method Actions
Gb_29805 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.04 Archaeplastida
MA_9741g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.02 Archaeplastida
Gb_29805 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.04 LandPlants
MA_9741g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.02 LandPlants
Gb_29805 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.07 SeedPlants
MA_9741g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.05 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005739 mitochondrion ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR032867 DYW_dom 557 681
IPR002885 Pentatricopeptide_repeat 282 330
IPR002885 Pentatricopeptide_repeat 383 430
IPR002885 Pentatricopeptide_repeat 458 483
IPR002885 Pentatricopeptide_repeat 153 180
IPR002885 Pentatricopeptide_repeat 121 149
IPR002885 Pentatricopeptide_repeat 183 210
IPR002885 Pentatricopeptide_repeat 523 553
IPR002885 Pentatricopeptide_repeat 86 116
No external refs found!