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  5. Len_g58640

Len_g58640 (AtCEST, CEST)


Aliases : AtCEST, CEST

Description : protein involved in PS-I assembly *(Y3IP1) & original description: none


Gene families : OG0005396 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005396_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g58640
Cluster HCCA: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
Adi_g080844 AtCEST, CEST protein involved in PS-I assembly *(Y3IP1) & original... 0.04 OrthoFinder output from all 47 species
Ala_g22544 AtCEST, CEST protein involved in PS-I assembly *(Y3IP1) & original... 0.04 OrthoFinder output from all 47 species
Als_g13014 AtCEST, CEST protein involved in PS-I assembly *(Y3IP1) & original... 0.05 OrthoFinder output from all 47 species
Aob_g02865 AtCEST, CEST protein involved in PS-I assembly *(Y3IP1) & original... 0.02 OrthoFinder output from all 47 species
Cba_g24345 AtCEST, CEST protein involved in PS-I assembly *(Y3IP1) & original... 0.03 OrthoFinder output from all 47 species
MA_7621845g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ppi_g49116 AtCEST, CEST protein involved in PS-I assembly *(Y3IP1) & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0118.g021213 AtCEST, CEST protein involved in PS-I assembly *(Y3IP1) & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005575 cellular_component IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009512 cytochrome b6f complex IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009536 plastid IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
CC GO:0070069 cytochrome complex IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!