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  5. Len_g58362

Len_g58362 (CPK5, ATCPK5)


Aliases : CPK5, ATCPK5

Description : calcium sensor *(CML) & original description: none


Gene families : OG0000042 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g58362
Cluster HCCA: Cluster_65

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00269p00011940 CPK17,... Protein modification.phosphorylation.CAMK kinase... 0.03 OrthoFinder output from all 47 species
Pir_g21694 PPCK1, ATPPCK1 EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
Ppi_g13716 CPK13 EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Solyc01g006840.3.1 CPK20, Solyc01g006840 protein kinase (CDPK) 0.03 OrthoFinder output from all 47 species
Solyc12g099790.3.1 CPK17, Solyc12g099790 protein kinase (CDPK) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005669 transcription factor TFIID complex IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 10 70
IPR002048 EF_hand_dom 80 141
No external refs found!