Len_g57738


Description : not classified & original description: none


Gene families : OG0000540 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000540_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g57738
Cluster HCCA: Cluster_115

Target Alias Description ECC score Gene Family Method Actions
Aev_g09743 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g08276 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g23545 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g29900 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene36396.t1 Aspi01Gene36396 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene36397.t1 Aspi01Gene36397 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene36398.t1 Aspi01Gene36398 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.11G037500.1 Ceric.11G037500 not classified & original description: pacid=50595583... 0.03 OrthoFinder output from all 47 species
Dac_g15422 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g00482 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g08078 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g27081 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os03g57520.1 LOC_Os03g57520 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g25842 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g35799 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g35886 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g57361 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e037399_P001 MKS1, Zm00001e037399 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006308 DNA catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR008889 VQ 63 86
No external refs found!