Len_g56773 (KNAT3)

Aliases : KNAT3

Description : KNOX-type transcription factor & original description: none

Gene families : OG0000252 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000252_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Len_g56773
Cluster	HCCA: Cluster_182

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00023p00178300	KNAT7, IXR11,...	Homeobox protein HD1 OS=Brassica napus	0.02	OrthoFinder output from all 47 species
AMTR_s00085p00165180	KNAT6, KNAT6L,...	RNA biosynthesis.transcriptional activation.HB...	0.03	OrthoFinder output from all 47 species
AT1G70510	KNAT2, ATK1	KNOTTED-like from Arabidopsis thaliana 2	0.02	OrthoFinder output from all 47 species
Adi_g019966	BUM1, SHL, STM,...	KNOX-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g21619	BUM1, SHL, STM,...	KNOX-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g70104	KNAT3	KNOX-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Cba_g09026	BUM1, SHL, STM,...	KNOX-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.10G031700.1	KNAT3, Ceric.10G031700	KNOX-type transcription factor & original description:...	0.07	OrthoFinder output from all 47 species
Cre08.g375400	KNAT6, KNAT6L, KNAT6S	RNA biosynthesis.transcriptional activation.HB...	0.01	OrthoFinder output from all 47 species
Dde_g48747	KNAT3	KNOX-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Gb_00572	BP, BP1, KNAT1	transcription factor (KNOX)	0.02	OrthoFinder output from all 47 species
Gb_00573	BUM1, SHL, STM,...	transcription factor (KNOX)	0.02	OrthoFinder output from all 47 species
LOC_Os03g03164.2	KNAT7, IXR11,...	transcription factor (KNOX)	0.02	OrthoFinder output from all 47 species
MA_10428500g0010	KNAT3	transcription factor (KNOX)	0.02	OrthoFinder output from all 47 species
Msp_g44272	KNAT3	KNOX-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Nbi_g27135	KNAT3	KNOX-type transcription factor & original description: none	0.11	OrthoFinder output from all 47 species
Pnu_g18663	BUM1, SHL, STM,...	KNOX-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g15325	KNAT4	KNOX-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g16367	KNAT3	KNOX-type transcription factor & original description: none	0.07	OrthoFinder output from all 47 species
Sacu_v1.1_s0142.g022803	No alias	not classified & original description: CDS=20-451	0.03	OrthoFinder output from all 47 species
Solyc12g010410.3.1	KNAT4, Solyc12g010410	transcription factor (KNOX)	0.02	OrthoFinder output from all 47 species
Spa_g47799	KNAT3	KNOX-type transcription factor & original description: none	0.09	OrthoFinder output from all 47 species
Spa_g47800	KNAT4	KNOX-type transcription factor & original description: none	0.08	OrthoFinder output from all 47 species
Tin_g45916	KNAT3	KNOX-type transcription factor & original description: none	0.08	OrthoFinder output from all 47 species
Zm00001e039044_P001	KNAT7, IXR11,...	transcription factor (KNOX)	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0005507	copper ion binding	IEP	HCCA
BP	GO:0006820	monoatomic anion transport	IEP	HCCA
MF	GO:0015267	channel activity	IEP	HCCA
MF	GO:0022803	passive transmembrane transporter activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR005540	KNOX1	186	224
IPR005541	KNOX2	248	296
IPR008422	Homeobox_KN_domain	397	436

External Links

No external refs found!

Len_g56773 (KNAT3)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation