Aliases : PACid_15415243
Description : 10.7 cell wall.modification Encodes an expansin. Naming convention from the Expansin Working Group (Kende et al, Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana. expansin A10 (EXPA10) CONTAINS InterPro DOMAIN/s: Pollen allergen, N-terminal (InterPro:IPR014734), Rare lipoprotein A (InterPro:IPR005132), Pollen allergen/expansin, C-terminal (InterPro:IPR007117), Barwin-related endoglucanase (InterPro:IPR009009), Expansin (InterPro:IPR002963), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112) BEST Arabidopsis thaliana protein match is: expansin A1 (TAIR:AT1G69530.2) Has 2216 Blast hits to 2213 proteins in 165 species: Archae - 0 Bacteria - 8 Metazoa - 0 Fungi - 52 Plants - 2112 Viruses - 0 Other Eukaryotes - 44 (source: NCBI BLink). & (chl4|516806 : 80.5
Gene families : OG_01_0000017 (Gene family) Phylogenetic Tree(s): OG0000017_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR network (cutoff 100): Smo231226 | |
Cluster | HCCA cluster: Cluster_125 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT1G69530 | ATEXPA1, EXP1,... | expansin A1 | 0.04 | Gene family | |
AT5G39270 | EXPA22, ATEXP22,... | expansin A22 | 0.02 | Gene family | |
AT5G39290 | ATEXP26, ATHEXP... | expansin A26 | 0.02 | Gene family | |
GSVIVT01029411001 | No alias | 10.7 cell wall.modification Encodes an expansin. Naming... | 0.03 | Gene family | |
GSVIVT01035233001 | No alias | 10.7 cell wall.modification member of Alpha-Expansin... | 0.02 | Gene family | |
LOC_Os03g60720 | Os03g0822000 | 10.7 cell wall.modification putative expansin. Naming... | 0.01 | Gene family | |
LOC_Os04g15840 | Os04g0228400 | 10.7 cell wall.modification member of Alpha-Expansin... | 0.01 | Gene family | |
LOC_Os05g19600 | Os05g0277000 | 10.7 cell wall.modification member of Alpha-Expansin... | 0.01 | Gene family | |
LOC_Os10g30340 | Os10g0439200 | 10.7 cell wall.modification member of Alpha-Expansin... | 0.01 | Gene family | |
LOC_Os10g39110 | Os10g0535900 | 10.7 cell wall.modification Member of Alpha-Expansin... | 0.02 | Gene family | |
MA_178775g0020 | No alias | 10.7 cell wall.modification member of Alpha-Expansin... | 0.01 | Gene family | |
Solyc09g018020.3.1 | Solyc09g018020.3 | 10.7 cell wall.modification Encodes an expansin. Naming... | 0.03 | Gene family | |
Zm00001d025018 | GRMZM2G074585 | 10.7 cell wall.modification member of Alpha-Expansin... | 0.02 | Gene family | |
Zm00001d026014 | GRMZM2G072121 | 10.7 cell wall.modification member of Alpha-Expansin... | 0.02 | Gene family | |
Zm00001d032876 | No alias | 10.7 cell wall.modification member of Alpha-Expansin... | 0.01 | Gene family | |
Zm00001d032886 | GRMZM2G414779 | 10.7 cell wall.modification member of Alpha-Expansin... | 0.01 | Gene family |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR009009 | RlpA-like_DPBB | 45 | 123 |
No external refs found! |